RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 XKR4Q5GH76 650 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 PYHIN1Q6K0P9 492 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.42■□□□□ 0.061e-323■■■■■ 89.8
SREBF1-201ENST00000261646 ZNF558Q96NG5 402 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 SAP130Q9H0E3 1048 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 CNIH4Q9P003 139 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 YARS2Q9Y2Z4 477 aaKnown RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 ARPC4-TTLL3A0A0A6YYG9 625 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 ASPDHA6ND91 283 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 SOX2P48431 317 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 STK19P49842 368 aaPredicted RBP15.41■□□□□ 0.06
SREBF1-201ENST00000261646 CTBP2P56545 445 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 SLC5A12Q1EHB4 618 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 ZMAT1Q5H9K5 638 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 PRSS36Q5K4E3 855 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 JAZF1Q86VZ6 243 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 CCDC116Q8IYX3 515 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 IL17RDQ8NFM7 739 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 OR51A7Q8NH64 312 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 FCAMRQ8WWV6 532 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 TEX10Q9NXF1 929 aaPredicted RBP15.41■□□□□ 0.06
SREBF1-201ENST00000261646 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.41■□□□□ 0.06
SREBF1-201ENST00000261646 LOC100509620A0A075B734 347 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 A8MUA0 341 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 I6L893 689 aaPredicted RBP15.41■□□□□ 0.06
SREBF1-201ENST00000261646 RGS9O75916 674 aaPredicted RBP15.41■□□□□ 0.06
SREBF1-201ENST00000261646 RASGRP1O95267 797 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 CCR8P51685 355 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 IFITM3Q01628 133 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 SCGB2B2Q4G0G5 96 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 COX18Q8N8Q8 333 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 SMPDL3AQ92484 453 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 CARS2Q9HA77 564 aaKnown RBP15.41■□□□□ 0.06
SREBF1-201ENST00000261646 NDUFAF4Q9P032 175 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 MBLAC1A4D2B0 266 aaPredicted RBP15.41■□□□□ 0.06
SREBF1-201ENST00000261646 PRODHO43272 600 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 GPR37L1O60883 481 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 ZNF432O94892 652 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 GIPRP48546 466 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 PGFP49763 221 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 GDI2P50395 445 aaKnown RBP15.41■□□□□ 0.06
SREBF1-201ENST00000261646 ARFIP1P53367 373 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 FKBP1BP68106 108 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 ODF4Q2M2E3 257 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 LDLRAD1Q5T700 205 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 FAM122CQ6P4D5 195 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 POMZP3Q6PJE2 187 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 WDR48Q8TAF3 677 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 ZCCHC10Q8TBK6 192 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 FAM46AQ96IP4 442 aaKnown RBP15.41■□□□□ 0.06
SREBF1-201ENST00000261646 QPCTLQ9NXS2 382 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 NOP16Q9Y3C1 178 aaKnown RBP15.41■□□□□ 0.06
SREBF1-201ENST00000261646 CSNK1G3Q9Y6M4 447 aa15.41■□□□□ 0.06
SREBF1-201ENST00000261646 TRBV23OR9-2A0A075B6M9 112 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 DUXAA6NLW8 204 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TRAPPC2P0DI81 140 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TRAPPC2BP0DI82 140 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 PTPN2P17706 415 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 CFL1P23528 166 aaKnown RBP15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TGM4P49221 684 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TAS2R43P59537 309 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TBPL1P62380 186 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 SKP1P63208 163 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TAF13Q15543 124 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 BAK1Q16611 211 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TOR1AIP1Q5JTV8 583 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 SIGIRRQ6IA17 410 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 PGBD3Q8N328 593 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 CCDC107Q8WV48 283 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 OTUB2Q96DC9 234 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 PDLIM5Q96HC4 596 aaKnown RBP15.4■□□□□ 0.06
SREBF1-201ENST00000261646 F2RL3Q96RI0 385 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 C17orf62Q9BQA9 187 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 PCDHB16Q9NRJ7 776 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 NLGN3Q9NZ94 848 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 HCSTQ9UBK5 93 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 CKLFQ9UBR5 152 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 KCNN3Q9UGI6 736 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TMEFF2Q9UIK5 374 aaPredicted RBP15.4■□□□□ 0.06
SREBF1-201ENST00000261646 DLEC1Q9Y238 1755 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 ABCA3Q99758 1704 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TEX46H3BTG2 121 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 H7BY64 318 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 SLC11A1P49279 550 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 RPS25P62851 125 aaKnown RBP15.4■□□□□ 0.06
SREBF1-201ENST00000261646 PLBD1Q6P4A8 553 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TMIEQ8NEW7 156 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 OR9A1PQ8NGU1 263 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 OR6F1Q8NGZ6 308 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 OR8S1Q8NH09 359 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 C16orf78Q8WTQ4 265 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 PRAP1Q96NZ9 151 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 TMEM39AQ9NV64 488 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 RASD1Q9Y272 281 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 SNX11Q9Y5W9 270 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 SOCS5O75159 536 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 GPX2P18283 190 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 RAB3BP20337 219 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 VAMP1P23763 118 aa15.4■□□□□ 0.06
SREBF1-201ENST00000261646 BMP8BP34820 402 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms