RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SMPD3Q9NY59 655 aaPredicted RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 EXOSC1Q9Y3B2 195 aaKnown RBP12.73□□□□□ -0.37
PRPF38A-201ENST00000257181 AKAP11Q9UKA4 1901 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 IDSB3KWA1 339 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 TBX1O43435 398 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC16A8O95907 504 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 AVPR2P30518 371 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 CAPZBP47756 277 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC35A1P78382 337 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 TNFRSF17Q02223 184 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 EPGNQ6UW88 154 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 CROCCP3Q8IVE0 287 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 PYURFQ96I23 114 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 IL17FQ96PD4 163 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 TTYH2Q9BSA4 534 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 ENKD1Q9H0I2 346 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 TMEM168Q9H0V1 697 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 TREX1Q9NSU2 369 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 HCSTQ9UBK5 93 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 MYH9P35579 1960 aaKnown RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 TSPAN11A1L157 253 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 SURF4O15260 269 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 RAD1O60671 282 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 SCGNO76038 276 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 PRDX3P30048 256 aaKnown RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 TMED1Q13445 227 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 IQCCQ4KMZ1 466 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF57Q68EA5 555 aaPredicted RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 ANKRD46Q86W74 232 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 NAXDQ8IW45 347 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 FANK1Q8TC84 345 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 PINK1Q9BXM7 581 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 TRIM36Q9NQ86 728 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 SEC14L4Q9UDX3 406 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 A0A0A6YYC8 382 aaPredicted RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 A0A1W2PPL8 197 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 I3L1I5 382 aaPredicted RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 CTNSO60931 367 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC43A1O75387 559 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 RDH16O75452 317 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 IFI30P13284 250 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 MAGP20916 626 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 MAOBP27338 520 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 FMO3P31513 532 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 GRIA1P42261 906 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 SPEM2Q0P670 501 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 DGLUCYQ7Z3D6 616 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 TMEM173Q86WV6 379 aaPredicted RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 ARFGAP1Q8N6T3 406 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF676Q8N7Q3 588 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 SLC2A12Q8TD20 617 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 GPN1Q9HCN4 374 aaPredicted RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 DIABLOQ9NR28 239 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 RAB26Q9ULW5 256 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 COL11A2P13942 1736 aaPredicted RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 KHDRBS3O75525 346 aaKnown RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 OLFM2O95897 454 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 AK4P27144 223 aaPredicted RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 ADRA1AP35348 466 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 OPRD1P41143 372 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 ZMAT1Q5H9K5 638 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 HENMT1Q5T8I9 393 aaKnown RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 RNF130Q86XS8 419 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF548Q8NEK5 533 aaPredicted RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 LINC00615Q96LM1 132 aaPredicted RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF184Q99676 751 aaPredicted RBP12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 CBLCQ9ULV8 474 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
PRPF38A-201ENST00000257181 TRAPPC13A5PLN9 417 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 PLD2O14939 933 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 FAM189A1O60320 539 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 PEPDP12955 493 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 DCTP40126 519 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 METRNLQ641Q3 311 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 NAPRTQ6XQN6 538 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 CENPSQ8N2Z9 138 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 ENKURQ8TC29 256 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 FGF14Q92915 247 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 FRMD6Q96NE9 622 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 CDK15Q96Q40 435 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 CLEC4MQ9H2X3 399 aaPredicted RBP12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 CD320Q9NPF0 282 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 IFT46Q9NQC8 304 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 FBXO9Q9UK97 447 aaPredicted RBP12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 SBF2Q86WG5 1849 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 A6NL46 340 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 H0YGG7 62 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 CCRL2O00421 344 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 SIX3O95343 332 aaPredicted RBP12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 DDAH2O95865 285 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 IL9P15248 144 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 S1PR1P21453 382 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 ARF3P61204 181 aaPredicted RBP12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 GABREP78334 506 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 ZMYND11Q15326 602 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 C6orf136Q5SQH8 315 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 ZNF283Q8N7M2 679 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 OR2T4Q8NH00 348 aa12.71□□□□□ -0.37
PRPF38A-201ENST00000257181 CCDC86Q9H6F5 360 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms