RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ZNF791Q3KP31 576 aaPredicted RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 OR4C15Q8NGM1 316 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 IL26Q9NPH9 171 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 TEX13CA0A0J9YWL9 993 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 SGK494L7N484 410 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 CNOT4O95628 575 aaKnown RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 SIX1Q15475 284 aaPredicted RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 LARP4Q71RC2 724 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 NRMQ8IXM6 262 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 RNF175Q8N4F7 328 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 MDGA1Q8NFP4 955 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 OR9A2Q8NGT5 310 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 ECHDC3Q96DC8 303 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 OR10A4Q9H209 315 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 FN3KQ9H479 309 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 MOV10Q9HCE1 1003 aaKnown RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 REV1Q9UBZ9 1251 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 SCP2D1Q9UJQ7 156 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 KNDC1Q76NI1 1749 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 ATP6V1G1O75348 118 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 CTSAP10619 480 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 NPRL3Q12980 569 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 RAB33AQ14088 237 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 ELOAQ14241 798 aaKnown RBP17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 OR52E8Q6IFG1 317 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 ZNF852Q6ZMS4 543 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 ZER1Q7Z7L7 766 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 TMEM151BQ8IW70 566 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 PIAS4Q8N2W9 510 aaPredicted RBP17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 OR5D16Q8NGK9 328 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 CD300LFQ8TDQ1 290 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 FRS2Q8WU20 508 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 RFT1Q96AA3 541 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 SEC14L4Q9UDX3 406 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 GLS2Q9UI32 602 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 IGKV6-21A0A0C4DH24 114 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 DLGAP1O14490 977 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 YES1P07947 543 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 GJA5P36382 358 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 BTBD16Q32M84 506 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 TUBA3EQ6PEY2 450 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 KCTD18Q6PI47 426 aaPredicted RBP17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 PLEKHG7Q6ZR37 379 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 RELL1Q8IUW5 271 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 OR9Q2Q8NGE9 314 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 TP63Q9H3D4 680 aaPredicted RBP17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 GMEB1Q9Y692 573 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 SMCO3A2RU48 225 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 KIAA0513O60268 411 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 FADDQ13158 208 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 HSD11B1LQ7Z5J1 315 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 AKAP1Q92667 903 aaKnown RBP eCLIP17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 FOXJ1Q92949 421 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 LMAN1LQ9HAT1 526 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 FANCFQ9NPI8 374 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 OR2S2Q9NQN1 319 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 CA5BQ9Y2D0 317 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 OR5K4A6NMS3 321 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 SLITRK5O94991 958 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 IFNA7P01567 189 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 FAM76BQ5HYJ3 339 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 ZNF35P13682 527 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 TUBG1P23258 451 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 SCAPQ12770 1279 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 CYB561A3Q8NBI2 242 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 SCRN2Q96FV2 425 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 FAM118AQ9NWS6 357 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 PAK1IP1Q9NWT1 392 aaPredicted RBP17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 CNIH4Q9P003 139 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 MYH13Q9UKX3 1938 aa17.78■□□□□ 0.44
SMARCC1-201ENST00000254480 LDB3O75112 727 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 P2RY2P41231 377 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 GPR143P51810 404 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 TMEM31Q5JXX7 168 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 ZNF584Q8IVC4 421 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 ACOT12Q8WYK0 555 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 SAMD11Q96NU1 681 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 TIMP1P01033 207 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 GKN3PP0CG01 181 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 PGCP20142 388 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 ZNF81P51508 661 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 HOXC5Q00444 222 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 MEDAGQ5VYS4 303 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 CENPSQ8N2Z9 138 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 GPR26Q8NDV2 337 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 OR52N2Q8NGI0 321 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 HDAC2Q92769 488 aaKnown RBP17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 VDAC3Q9Y277 283 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 ATE1O95260 518 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 PPP1R3DO95685 299 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 STT3AP46977 705 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 CLDN8P56748 225 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 HNRNPKP61978 463 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 C6orf89Q6UWU4 347 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 C17orf99Q6UX52 265 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 Q6ZSR6 202 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 OR14L1PQ8NHC6 308 aa17.77■□□□□ 0.44
SMARCC1-201ENST00000254480 ZC3H10Q96K80 434 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms