RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 TUBA3EQ6PEY2 450 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ZER1Q7Z7L7 766 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 C19orf18Q8NEA5 215 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 FAM46DQ8NEK8 389 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 KBTBD8Q8NFY9 601 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 LILRB4Q8NHJ6 448 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 POF1BQ8WVV4 589 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 OR2A14Q96R47 310 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 KLHL31Q9H511 634 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 WASH6PQ9NQA3 447 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 GPR34Q9UPC5 381 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 SLC27A6Q9Y2P4 619 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 YARS2Q9Y2Z4 477 aaKnown RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 KCNE3Q9Y6H6 103 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 SAGE2PA6NJ88 616 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 GLOD5A6NK44 160 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 FAM25AB3EWG3 89 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 FAM25CB3EWG5 89 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 FAM25GB3EWG6 89 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 TSPAN4O14817 238 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ADAP00813 363 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 OR12D1P0DN82 309 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ENDOUP21128 410 aaKnown RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 CD79BP40259 229 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 MANFP55145 182 aaKnown RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 HYAL2Q12891 473 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 BCL2A1Q16548 175 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 TJAP1Q5JTD0 557 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ATAD3CQ5T2N8 411 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 KIF18BQ86Y91 864 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 LAX1Q8IWV1 398 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 IL17RDQ8NFM7 739 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 OR5K2Q8NHB8 316 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 TFGQ92734 400 aaPredicted RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 CCDC120Q96HB5 630 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 NLNQ9BYT8 704 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 GLIPR2Q9H4G4 154 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 CHST2Q9Y4C5 530 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 URB1O60287 2271 aaKnown RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 KIAA0355O15063 1070 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 PDPK1O15530 556 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 HOXC11O43248 304 aaPredicted RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 PI15O43692 258 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 NARSO43776 548 aaKnown RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 MMP11P24347 488 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 TNFSF8P32971 234 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 RFX2P48378 723 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 SLC16A1P53985 500 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 TAS2R38P59533 333 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ALDH6A1Q02252 535 aaKnown RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 DBPQ10586 325 aaPredicted RBP9.55□□□□□ -0.88
COPB1-201ENST00000249923 ZNF234Q14588 700 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 NDUFA5Q16718 116 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ZSWIM7Q19AV6 140 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 SMUG1Q53HV7 270 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 HIST2H2AA3Q6FI13 130 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ACSM5Q6NUN0 579 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ASB18Q6ZVZ8 466 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ZNF765Q7L2R6 523 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 SHISA5Q8N114 240 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 MORN4Q8NDC4 146 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 GPR151Q8TDV0 419 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 CREB3L4Q8TEY5 395 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 ZG16BQ96DA0 208 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 CRELD1Q96HD1 420 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 UCK2Q9BZX2 261 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 DYRK4Q9NR20 520 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 NKIRAS2Q9NYR9 191 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 CARD8Q9Y2G2 431 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 CFAP54Q96N23 3096 aa9.55□□□□□ -0.88
COPB1-201ENST00000249923 PLD2O14939 933 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 CHRM4P08173 479 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 MSL3P1P0C860 447 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 CCT3P49368 545 aaKnown RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 REEP5Q00765 189 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 ZNF45Q02386 682 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 SLAMF1Q13291 335 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 BAK1Q16611 211 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 TOR1AIP1Q5JTV8 583 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 TRIQKQ629K1 86 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 ZNF544Q6NX49 715 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 PODNL1Q6PEZ8 512 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 PLET1Q6UQ28 207 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 RFPL4BQ6ZWI9 263 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 KRT74Q7RTS7 529 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 GLCCI1Q86VQ1 547 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 TCEANCQ8N8B7 351 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 OR6T1Q8NGN1 323 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 SUN3Q8TAQ9 357 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 SPPL3Q8TCT6 385 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 SETD7Q8WTS6 366 aaKnown RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 OR5P2Q8WZ92 322 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 SMPDL3AQ92484 453 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 TM9SF4Q92544 642 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 ZNF354BQ96LW1 612 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 MBNL1Q9NR56 388 aaKnown RBP9.54□□□□□ -0.88
COPB1-201ENST00000249923 SERGEFQ9UGK8 458 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 ZNF222Q9UK12 451 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 A0A0A6YYD5 115 aa9.54□□□□□ -0.88
COPB1-201ENST00000249923 OR10H3O60404 316 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms