RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TRMT12Q53H54 448 aaKnown RBP22.47■■□□□ 1.19
SDF2L1-201ENST00000248958 SLC22A10Q63ZE4 541 aa22.47■■□□□ 1.19
SDF2L1-201ENST00000248958 OR52R1Q8NGF1 315 aa22.47■■□□□ 1.19
SDF2L1-201ENST00000248958 OR9A2Q8NGT5 310 aa22.47■■□□□ 1.19
SDF2L1-201ENST00000248958 EGLN2Q96KS0 407 aa22.47■■□□□ 1.19
SDF2L1-201ENST00000248958 GPR137Q96N19 417 aa22.47■■□□□ 1.19
SDF2L1-201ENST00000248958 EXO1Q9UQ84 846 aaKnown RBP22.47■■□□□ 1.19
SDF2L1-201ENST00000248958 ZGRF1Q86YA3 2104 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 SKAP2O75563 359 aaPredicted RBP22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 PCSK2P16519 638 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 TACR1P25103 407 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 RPL3P39023 403 aaKnown RBP22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 RPL14P50914 215 aaKnown RBP22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 MAD2L1Q13257 205 aaPredicted RBP22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 EXOSC7Q15024 291 aaKnown RBP22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 NTRK2Q16620 822 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 CES4AQ5XG92 561 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 RGS9BPQ6ZS82 235 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 GK5Q6ZS86 529 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 R3HCC1LQ7Z5L2 792 aaKnown RBP22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 TRIM42Q8IWZ5 723 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 ZNF781Q8N8C0 355 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 PAQR8Q8TEZ7 354 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 MTERF3Q96E29 417 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 HSPBAP1Q96EW2 488 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 FAM173AQ9BQD7 235 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 REEP4Q9H6H4 257 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 CNIH4Q9P003 139 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 HAO1Q9UJM8 370 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 NPFFR2Q9Y5X5 522 aa22.46■■□□□ 1.19
SDF2L1-201ENST00000248958 EML6Q6ZMW3 1958 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 NPIPA5E9PKD4 350 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 TP53I11O14683 189 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 ACOX3O15254 700 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 PLOD3O60568 738 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 PEX11AO75192 247 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 AGFG2O95081 481 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 UNC5CO95185 931 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 IFI6P09912 130 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 PRPS2P11908 318 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 BCKDHAP12694 445 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 NAGAP17050 411 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 SOX18P35713 384 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 NCBP2P52298 156 aaKnown RBP eCLIP22.45■■□□□ 1.183e-14■□□□□ 8.8
SDF2L1-201ENST00000248958 WDR4P57081 412 aaKnown RBP22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 GPR85P60893 370 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 PSPHP78330 225 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 RPP38P78345 283 aaKnown RBP22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 MRPS35P82673 323 aaKnown RBP22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 SRSF11Q05519 484 aaKnown RBP22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 SMU1Q2TAY7 513 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 OR2M7Q8NG81 312 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 RAB3IL1Q8TBN0 382 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 LCORQ96JN0 433 aaPredicted RBP22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 TSSK3Q96PN8 268 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 SH2D2AQ9NP31 389 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 NPIPA1Q9UND3 350 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 SLC5A6Q9Y289 635 aa22.45■■□□□ 1.18
SDF2L1-201ENST00000248958 A0A087WV62 115 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 ACOT7O00154 380 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 ASNA1O43681 348 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 COQ9O75208 318 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 SVILO95425 2214 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 DRD5P21918 477 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 PTGER1P34995 402 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 PPICP45877 212 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 EMDP50402 254 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 SRSF1Q07955 248 aaKnown RBP eCLIP22.44■■□□□ 1.188e-9■□□□□ 10.5
SDF2L1-201ENST00000248958 TBCELQ5QJ74 424 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 C6orf136Q5SQH8 315 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 FAM47EQ6ZV65 393 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 HDXQ7Z353 690 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 SIAH3Q8IW03 269 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 GHDCQ8N2G8 530 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 FNDC5Q8NAU1 212 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 ZFP28Q8NHY6 868 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 KAT2AQ92830 837 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 PPCDCQ96CD2 204 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 TUBGCP3Q96CW5 907 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 C3orf30Q96M34 536 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 SECISBP2Q96T21 854 aaKnown RBP22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 SORT1Q99523 831 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 C20orf27Q9GZN8 174 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 DEPPQ9NTK1 212 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 TAS2R9Q9NYW1 312 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 OSGIN2Q9Y236 505 aa22.44■■□□□ 1.18
SDF2L1-201ENST00000248958 RP1L1Q8IWN7 2480 aaPredicted RBP22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 ATP6AP2A0A1C7CYW4 349 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 PLOD2O00469 737 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 TFECO14948 347 aaPredicted RBP22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 ATP6AP2O75787 350 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 JUNP05412 331 aaKnown RBP22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 STSP08842 583 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 BST1Q10588 318 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 DUSP8Q13202 625 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 RPS6KA2Q15349 733 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 PRSS53Q2L4Q9 553 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 ATG16L1Q676U5 607 aa22.43■■□□□ 1.18
SDF2L1-201ENST00000248958 FBXW8Q8N3Y1 598 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms