RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 METTL2BQ6P1Q9 378 aaKnown RBP10.46□□□□□ -0.73
COPA-201ENST00000241704 GAREM2Q75VX8 874 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 NPAS3Q8IXF0 933 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 PJA1Q8NG27 643 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 PRAP1Q96NZ9 151 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 SLC12A9Q9BXP2 914 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 AMBRA1Q9C0C7 1298 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 GSTO2Q9H4Y5 243 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 TMEM30AQ9NV96 361 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 MCUBQ9NWR8 336 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 LHX3Q9UBR4 397 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 OR1A2Q9Y585 309 aa10.46□□□□□ -0.73
COPA-201ENST00000241704 A0A0U1RQS6 177 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 PDYNP01213 254 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 FGF4P08620 206 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 ATP12AP54707 1039 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 SLAMF1Q13291 335 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 KANK2Q63ZY3 851 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 CFAP77Q6ZQR2 320 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 RANBP3LQ86VV4 465 aaPredicted RBP10.46□□□□□ -0.74
COPA-201ENST00000241704 RNF130Q86XS8 419 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 OR10Q1Q8NGQ4 319 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 C3orf30Q96M34 536 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 NEDD4LQ96PU5 975 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 SLC22A12Q96S37 553 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 OR2A25A4D2G3 310 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 OR6C74A6NCV1 312 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 TRIM64A6NGJ6 449 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 CCNB2O95067 398 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 GZMKP49863 264 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 SLC35A2P78381 396 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 RCAN2Q14206 197 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 ABRAXAS2Q15018 415 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 FAM78AQ5JUQ0 283 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 CDKL4Q5MAI5 379 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 ZSWIM9Q86XI8 627 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 OR8K3Q8NH51 312 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 KLHL6Q8WZ60 621 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 ST6GAL2Q96JF0 529 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 HSPA12BQ96MM6 686 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 KCTD7Q96MP8 289 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 MND1Q9BWT6 205 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 NEUROD4Q9HD90 331 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 DLGAP4Q9Y2H0 992 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 SIT1Q9Y3P8 196 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 PCDHGA2Q9Y5H1 932 aa10.46□□□□□ -0.74
COPA-201ENST00000241704 A6NCN8 305 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 CLCA1A8K7I4 914 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 BCKDHAP12694 445 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 CFL1P23528 166 aaKnown RBP10.45□□□□□ -0.74
COPA-201ENST00000241704 GJA4P35212 333 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 TNFRSF4P43489 277 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 VSX2P58304 361 aaPredicted RBP10.45□□□□□ -0.74
COPA-201ENST00000241704 LAPTM4BQ86VI4 370 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 PLXDC1Q8IUK5 500 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 Q8N402 240 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 LINC01599Q8WXQ3 324 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 TOE1Q96GM8 510 aaKnown RBP10.45□□□□□ -0.74
COPA-201ENST00000241704 MBOAT4Q96T53 435 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 OR8D2Q9GZM6 311 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 KLHL31Q9H511 634 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 MVB12BQ9H7P6 319 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 IFT22Q9H7X7 185 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 NUMA1Q14980 2115 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 MROH6A6NGR9 719 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 SHOXO15266 292 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 DIRAS1O95057 198 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 GADD45GO95257 159 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 PLATP00750 562 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 ANXA8P13928 327 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 HMGA1P17096 107 aaKnown RBP10.45□□□□□ -0.74
COPA-201ENST00000241704 RGS6P49758 472 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 TPMTP51580 245 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 HNRNPA0Q13151 305 aaKnown RBP10.45□□□□□ -0.74
COPA-201ENST00000241704 DOC2AQ14183 400 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 SMN1Q16637 294 aaKnown RBP10.45□□□□□ -0.74
COPA-201ENST00000241704 PAMR1Q6UXH9 720 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 CCDC36Q8IYA8 594 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 PGBD5Q8N414 524 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 ZNF566Q969W8 418 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 NXPE3Q969Y0 559 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 CREB3L1Q96BA8 519 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 BARD1Q99728 777 aaKnown RBP10.45□□□□□ -0.74
COPA-201ENST00000241704 APC2O95996 2303 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 NUPL2O15504 423 aaKnown RBP10.45□□□□□ -0.74
COPA-201ENST00000241704 PROM1O43490 865 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 HCN1O60741 890 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 CXCL10P02778 98 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 HEXBP07686 556 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 TGFBR1P36897 503 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 OTUD1Q5VV17 481 aaPredicted RBP10.45□□□□□ -0.74
COPA-201ENST00000241704 TIGD3Q6B0B8 471 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 RSPO2Q6UXX9 243 aaPredicted RBP10.45□□□□□ -0.74
COPA-201ENST00000241704 NUP54Q7Z3B4 507 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 P4HA3Q7Z4N8 544 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 MFSD6LQ8IWD5 586 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 VN1R2Q8NFZ6 395 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 OR4K17Q8NGC6 315 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 OR5AK3PQ8NH89 298 aa10.45□□□□□ -0.74
COPA-201ENST00000241704 COQ8BQ96D53 544 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms