RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 NUMA1Q14980 2115 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 PLXNB3Q9ULL4 1909 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 A0A1W2PPL8 197 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 IGSF6O95976 241 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 C8GP07360 202 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 STOMP27105 288 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 SERPINA4P29622 427 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 HEPACAMQ14CZ8 416 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 IER5LQ5T953 404 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 LHX8Q68G74 356 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 TXNDC8Q6A555 127 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 TPRG1Q6ZUI0 275 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 DDX53Q86TM3 631 aaKnown RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 MARCH9Q86YJ5 346 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 PIAS4Q8N2W9 510 aaPredicted RBP13.34□□□□□ -0.27
SF1-201ENST00000227503 LMNTD1Q8N9Z9 388 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 SCRN2Q96FV2 425 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 IGSF21Q96ID5 467 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 LRR1Q96L50 414 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 P2RY13Q9BPV8 354 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 SLC35A5Q9BS91 424 aa13.34□□□□□ -0.27
SF1-201ENST00000227503 PRRC2BQ5JSZ5 2229 aaKnown RBP13.33□□□□□ -0.27
SF1-201ENST00000227503 GNG14A0A1W2PPG7 69 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 OLFM2O95897 454 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 PIPP12273 146 aaPredicted RBP13.33□□□□□ -0.28
SF1-201ENST00000227503 CPEP16870 476 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 CD70P32970 193 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 SOAT1P35610 550 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 CCR6P51684 374 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 PUDPQ08623 228 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 ACSM2AQ08AH3 577 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 KCNC3Q14003 757 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.285e-7■□□□□ 9.8
SF1-201ENST00000227503 NCF4Q15080 339 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 ACSM2BQ68CK6 577 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 TPGS2Q68CL5 300 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 STPG2Q8N412 459 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 OR2AP1Q8NGE2 309 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 SOSTQ9BQB4 213 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 CHIAQ9BZP6 476 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 FZD3Q9NPG1 666 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 FAM120CQ9NX05 1096 aaKnown RBP13.33□□□□□ -0.28
SF1-201ENST00000227503 DIMT1Q9UNQ2 313 aaKnown RBP13.33□□□□□ -0.28
SF1-201ENST00000227503 PLXND1Q9Y4D7 1925 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 A0A1W2PRG6 482 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 LINC01387J3KSC0 135 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 DPM1O60762 260 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 ANXA3P12429 323 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 LIMS1P48059 325 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 HNMTP50135 292 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 CLLU1Q5K131 121 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 IDNKQ5T6J7 187 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 ZNF770Q6IQ21 691 aaPredicted RBP13.33□□□□□ -0.28
SF1-201ENST00000227503 DEF8Q6ZN54 512 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 OLIG3Q7RTU3 272 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 TMEM163Q8TC26 289 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 AP3S1Q92572 193 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 CREB3L1Q96BA8 519 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 ECHDC3Q96DC8 303 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 NLGN3Q9NZ94 848 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 SPATA2Q9UM82 520 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 SF3B6Q9Y3B4 125 aaKnown RBP13.33□□□□□ -0.28
SF1-201ENST00000227503 RPL36Q9Y3U8 105 aaKnown RBP13.33□□□□□ -0.28
SF1-201ENST00000227503 KCNMB2Q9Y691 235 aa13.33□□□□□ -0.28
SF1-201ENST00000227503 PIPSLA2A3N6 862 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 GFYI3L273 518 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 SLC30A4O14863 429 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 SCAMP2O15127 329 aaKnown RBP13.32□□□□□ -0.28
SF1-201ENST00000227503 ANXA4P09525 319 aaPredicted RBP13.32□□□□□ -0.28
SF1-201ENST00000227503 OR56A5P0C7T3 313 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 PCSK2P16519 638 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 DNASE1P24855 282 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 SLC6A1P30531 599 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 BTCP35070 178 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 CTSOP43234 321 aaPredicted RBP13.32□□□□□ -0.28
SF1-201ENST00000227503 RAB14P61106 215 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 ZSWIM7Q19AV6 140 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 CCNJQ5T5M9 372 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 SHEQ5VZ18 495 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 RAET1GQ6H3X3 334 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 TMEM107Q6UX40 140 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 FAM92BQ6ZTR7 304 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 NR2C2APQ86WQ0 139 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 OR8J2Q8NGG1 315 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 CSGALNACT1Q8TDX6 532 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 KIAA1143Q96AT1 154 aaPredicted RBP13.32□□□□□ -0.28
SF1-201ENST00000227503 ART5Q96L15 291 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 SAMD11Q96NU1 681 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 RNF32Q9H0A6 362 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 SAV1Q9H4B6 383 aaPredicted RBP13.32□□□□□ -0.28
SF1-201ENST00000227503 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 DNAJC11Q9NVH1 559 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 NKIRAS2Q9NYR9 191 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 ATP6V1HQ9UI12 483 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 HCN2Q9UL51 889 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 PPIL1Q9Y3C6 166 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 MPZL2O60487 215 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 PLATP00750 562 aa13.32□□□□□ -0.28
SF1-201ENST00000227503 HIST1H2AGP0C0S8 130 aaPredicted RBP13.32□□□□□ -0.28
SF1-201ENST00000227503 MPC1LP0DKB6 136 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms