RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ERVK-19Q9WJR5 959 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 SH3D21A4FU49 640 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 C1SP09871 688 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 BMP1P13497 986 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 ZNF28P17035 718 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 VAMP1P23763 118 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 GTDC1Q4AE62 458 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 TMEM240Q5SV17 173 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 RTN4RL1Q86UN2 441 aaPredicted RBP17.53■□□□□ 0.4
CLIP2-201ENST00000223398 TOMM5Q8N4H5 51 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 OR2A12Q8NGT7 310 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 CNIH3Q8TBE1 160 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 TMEM168Q9H0V1 697 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 CLEC4EQ9ULY5 219 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 L7N2F9 121 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 F11P03951 625 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 HOXC13P31276 330 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 VAMP2P63027 116 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 RCAN2Q14206 197 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 VTCN1Q7Z7D3 282 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 LHFPL3Q86UP9 236 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 EDAQ92838 391 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 FAM46AQ96IP4 442 aaKnown RBP17.53■□□□□ 0.4
CLIP2-201ENST00000223398 ZNF221Q9UK13 617 aa17.53■□□□□ 0.4
CLIP2-201ENST00000223398 AQP9O43315 295 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 ITGB8P26012 769 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 CCDC80Q76M96 950 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 UBE2Q1Q7Z7E8 422 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 MTMR10Q9NXD2 777 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 FBXO9Q9UK97 447 aaPredicted RBP17.52■□□□□ 0.4
CLIP2-201ENST00000223398 C4AP0C0L4 1744 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.52■□□□□ 0.4
CLIP2-201ENST00000223398 ORC5O43913 435 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 ATE1O95260 518 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 SERTAD2Q14140 314 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 LCTLQ6UWM7 567 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 WDR53Q7Z5U6 358 aaPredicted RBP17.52■□□□□ 0.4
CLIP2-201ENST00000223398 TMED4Q7Z7H5 227 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 PPP1R3BQ86XI6 285 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 ZUFSPQ96AP4 578 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 DDIT4LQ96D03 193 aa17.52■□□□□ 0.4
CLIP2-201ENST00000223398 DCNP07585 359 aaKnown RBP17.52■□□□□ 0.39
CLIP2-201ENST00000223398 CELP19835 753 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 ELK4P28324 431 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 OR1D4P47884 311 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 FOXA1P55317 472 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 DCP2Q8IU60 420 aaKnown RBP17.52■□□□□ 0.39
CLIP2-201ENST00000223398 GID4Q8IVV7 300 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 TSPEARQ8WU66 669 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 L3HYPDHQ96EM0 354 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 DMRT3Q9NQL9 472 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 RLN2P04090 185 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 ROR2Q01974 943 aaKnown RBP17.52■□□□□ 0.39
CLIP2-201ENST00000223398 TRIM61Q5EBN2 209 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 STX12Q86Y82 276 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 SCML4Q8N228 414 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 OR52E2Q8NGJ4 325 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 OR4K13Q8NH42 304 aa17.52■□□□□ 0.39
CLIP2-201ENST00000223398 CDC14CA4D256 554 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 F3P13726 295 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 MAPK3P27361 379 aaPredicted RBP17.51■□□□□ 0.39
CLIP2-201ENST00000223398 ACOT4Q8N9L9 421 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 NAT6Q93015 286 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 OR5B2Q96R09 309 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 SECISBP2Q96T21 854 aaKnown RBP17.51■□□□□ 0.39
CLIP2-201ENST00000223398 ZNF559Q9BR84 538 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 ULBP3Q9BZM4 244 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 HSFX1Q9UBD0 423 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 ENPP6Q6UWR7 440 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 BEND4Q6ZU67 534 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 RBM12BQ8IXT5 1001 aaKnown RBP17.51■□□□□ 0.39
CLIP2-201ENST00000223398 SLC5A8Q8N695 610 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 OR8S1Q8NH09 359 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 DMRTB1Q96MA1 342 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 WASF3Q9UPY6 502 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 KIAA0100Q14667 2235 aaKnown RBP17.51■□□□□ 0.39
CLIP2-201ENST00000223398 EIF3FO00303 357 aaPredicted RBP17.51■□□□□ 0.39
CLIP2-201ENST00000223398 IVDP26440 423 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 RFLNAQ6ZTI6 216 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 PBX4Q9BYU1 374 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 SLC7A11Q9UPY5 501 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 XPNPEP2O43895 674 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 SNAP29O95721 258 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 PLEKHG7Q6ZR37 379 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 CYS1Q717R9 158 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 ZER1Q7Z7L7 766 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 IGFN1Q86VF2 1251 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 OR52N2Q8NGI0 321 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 HS6ST2Q96MM7 605 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 TRPV4Q9HBA0 871 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 EIF3KQ9UBQ5 218 aaKnown RBP17.51■□□□□ 0.39
CLIP2-201ENST00000223398 MGAT4AQ9UM21 535 aa17.51■□□□□ 0.39
CLIP2-201ENST00000223398 TEX13DA0A0J9YY54 714 aaPredicted RBP17.5■□□□□ 0.39
CLIP2-201ENST00000223398 YY2O15391 372 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 NUDT1P36639 197 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 ERVK-18Q9QC07 812 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 PGAP2Q9UHJ9 254 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 EXOSC1Q9Y3B2 195 aaKnown RBP17.5■□□□□ 0.39
CLIP2-201ENST00000223398 ZNF43P17038 809 aa17.5■□□□□ 0.39
CLIP2-201ENST00000223398 KCNAB2Q13303 367 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms