RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 CCNYL1Q8N7R7 359 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 ZNF615Q8N8J6 731 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 CCDC63Q8NA47 563 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 OR5M9Q8NGP3 310 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 OR10Q1Q8NGQ4 319 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 RDH11Q8TC12 318 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 SPPL2AQ8TCT8 520 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 TM4SF18Q96CE8 201 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 ERP27Q96DN0 273 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 RILPQ96NA2 401 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 SPOCK3Q9BQ16 436 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 ACPTQ9BZG2 426 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 METTL7AQ9H8H3 244 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 SLC24A3Q9HC58 644 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 ACKR4Q9NPB9 350 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 MAT2BQ9NZL9 334 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 ZNF225Q9UK10 706 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 CNOT11Q9UKZ1 510 aaKnown RBP13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 RNF6Q9Y252 685 aa13.18□□□□□ -0.3
RHOXF1-201ENST00000217999 A0A1W2PS29 197 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 LRRC3CA6NJW4 275 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 FAM90A27PA6NNH2 459 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 LRATO95237 230 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 CELA3AP09093 270 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 PRF1P14222 555 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 NAGAP17050 411 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 ELAVL4P26378 380 aaKnown RBP13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 ABCD3P28288 659 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 TIA1P31483 386 aaKnown RBP eCLIP13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 CCT5P48643 541 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 FBXW4P57775 412 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 PMPCAQ10713 525 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 SF3B4Q15427 424 aaKnown RBP eCLIP13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 PRICKLE4Q2TBC4 344 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 TCHHL1Q5QJ38 904 aaPredicted RBP13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 ZYG11AQ6WRX3 759 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 MEX3BQ6ZN04 569 aaKnown RBP13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 MARVELD2Q8N4S9 558 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 NEIL3Q8TAT5 605 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 ZNF675Q8TD23 568 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 UCN3Q969E3 161 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 HSPBAP1Q96EW2 488 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 ITPAQ9BY32 194 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 TRIM8Q9BZR9 551 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 IQCGQ9H095 443 aaKnown RBP13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 MID1IP1Q9NPA3 183 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 KCNJ16Q9NPI9 418 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 CES1P1Q9UKY3 287 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 GRID1Q9ULK0 1009 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 DLGAP4Q9Y2H0 992 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 PCDHGB3Q9Y5G1 929 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 EXPH5Q8NEV8 1989 aa13.17□□□□□ -0.3
RHOXF1-201ENST00000217999 LRBAP50851 2863 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 C15orf38-AP3S2A0A0A6YYH1 394 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 COPEO14579 308 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 TRIM3O75382 744 aaPredicted RBP13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 PPM1BO75688 479 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 IL3P08700 152 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 KRT20P35900 424 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 NUP107P57740 925 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 ZNF763Q0D2J5 394 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 CDSNQ15517 529 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 NNATQ16517 81 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 EMC4Q5J8M3 183 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 SPDYAQ5MJ70 313 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 TMEM64Q6YI46 380 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 TDRPQ86YL5 185 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 HOMEZQ8IX15 550 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 PM20D2Q8IYS1 436 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 PRR22Q8IZ63 422 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 FAM9CQ8IZT9 166 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 LILRB4Q8NHJ6 448 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 MZB1Q8WU39 189 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 ADIPOR1Q96A54 375 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 LCORQ96JN0 433 aaPredicted RBP13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 TTYH2Q9BSA4 534 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 OSBPL11Q9BXB4 747 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 NXF5Q9H1B4 397 aaKnown RBP13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 SLC6A15Q9H2J7 730 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 GSTO2Q9H4Y5 243 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 EHD3Q9NZN3 535 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 KLRF1Q9NZS2 232 aa13.16□□□□□ -0.3
RHOXF1-201ENST00000217999 FRG2CA6NGY1 282 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 SMIM23A6NLE4 172 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 C19orf84I3L1E1 186 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 ABCB7O75027 752 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 TRAPPC6AO75865 159 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 ANXA4P09525 319 aaPredicted RBP13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 RFPL3SP0C7P2 107 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 NTSP30990 170 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 SLCO1A2P46721 670 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 ZFP36L2P47974 494 aaKnown RBP13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 HTR6P50406 440 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 HMGCS1Q01581 520 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 EXOSC7Q15024 291 aaKnown RBP13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 TOMM20Q15388 145 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 GALNT18Q6P9A2 607 aa13.15□□□□□ -0.3
RHOXF1-201ENST00000217999 FAM111BQ6SJ93 734 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms