RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ZNF705BP0CI00 300 aaPredicted RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 HOXA10P31260 410 aaPredicted RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 RFC3P40938 356 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 FRKP42685 505 aaPredicted RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 BIDP55957 195 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 KCNC3Q14003 757 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 MSMO1Q15800 293 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 MTX3Q5HYI7 312 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 B3GLCTQ6Y288 498 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 GID4Q8IVV7 300 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 MB21D2Q8IYB1 491 aaPredicted RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 OR6N2Q8NGY6 317 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 OR56A3Q8NH54 315 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 FCGR1BQ92637 280 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 BADQ92934 168 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 PFDN5Q99471 154 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 KATNB1Q9BVA0 655 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 SEMA6AQ9H2E6 1030 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 CPNE5Q9HCH3 593 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 GALNT9Q9HCQ5 603 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 NXT1Q9UKK6 140 aaKnown RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 WDR45Q9Y484 360 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 LRRC7Q96NW7 1537 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 DEPDC5O75140 1603 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 C12orf71A8MTZ7 269 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 LEFTY2O00292 366 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 ENPP3O14638 875 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 KNG1P01042 644 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 C5AR1P21730 350 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 TGM1P22735 817 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 OGDHQ02218 1023 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 NRG1Q02297 640 aaPredicted RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 ZNF33BQ06732 778 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 GJB7Q6PEY0 223 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 OR5J2Q8NH18 312 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 PIWIL2Q8TC59 973 aaKnown RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 SLC38A5Q8WUX1 472 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 GIMAP1Q8WWP7 306 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 C3orf49Q96BT1 292 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 RBM14Q96PK6 669 aaKnown RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 NKX1-2Q9UD57 310 aaPredicted RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 KIF25Q9UIL4 384 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 CEBPZOSA8MTT3 80 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 ATP1B2P14415 290 aaPredicted RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 ZNF628Q5EBL2 1059 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 NXNL2Q5VZ03 156 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 NHLRC2Q8NBF2 726 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 CPPED1Q9BRF8 314 aaPredicted RBP3.3□□□□□ -1.88
NEB-201ENST00000172853 CDCP1Q9H5V8 836 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 CLEC4EQ9ULY5 219 aa3.3□□□□□ -1.88
NEB-201ENST00000172853 XKP51811 444 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 CDH12P55289 794 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 SPOCK1Q08629 439 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 SLBPQ14493 270 aaKnown RBP eCLIP3.29□□□□□ -1.88
NEB-201ENST00000172853 TMED4Q7Z7H5 227 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 NKD2Q969F2 451 aaPredicted RBP3.29□□□□□ -1.88
NEB-201ENST00000172853 NMUR2Q9GZQ4 415 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 MRPL42Q9Y6G3 142 aaKnown RBP3.29□□□□□ -1.88
NEB-201ENST00000172853 BLACEA4D250 179 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 RFXAPO00287 272 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 CRXO43186 299 aaPredicted RBP3.29□□□□□ -1.88
NEB-201ENST00000172853 AHCYL1O43865 530 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 CD79BP40259 229 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 MAGEA11P43364 429 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 DCAF7P61962 342 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 C1orf61Q13536 156 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 SFXN4Q6P4A7 337 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 OR2M7Q8NG81 312 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 NFKBIDQ8NI38 313 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 APH1BQ8WW43 257 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 TMEM40Q8WWA1 233 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 TFGQ92734 400 aaPredicted RBP3.29□□□□□ -1.88
NEB-201ENST00000172853 DCLRE1CQ96SD1 692 aaKnown RBP3.29□□□□□ -1.88
NEB-201ENST00000172853 MRPL45Q9BRJ2 306 aaKnown RBP3.29□□□□□ -1.88
NEB-201ENST00000172853 RIOX1Q9H6W3 641 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 KCNIP2Q9NS61 270 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 PDE10AQ9Y233 779 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 MYH11P35749 1972 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 RGPD5Q99666 1765 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 GDPD3Q7L5L3 318 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 SERINC5Q86VE9 423 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 OR51T1Q8NGJ9 327 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 NPLOC4Q8TAT6 608 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 SARAFQ96BY9 339 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 HERC2P3Q9BVR0 1158 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 MKLN1Q9UL63 735 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 QRICH2Q9H0J4 1663 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 A0A1B0GVT2 93 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 GMDSO60547 372 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 SEMA4FO95754 770 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 PIRTP0C851 137 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 MRPL19P49406 292 aaKnown RBP3.29□□□□□ -1.88
NEB-201ENST00000172853 ACTA2P62736 377 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 ACTC1P68032 377 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 ACTA1P68133 377 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 GAS6Q14393 721 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 FIGNQ5HY92 759 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 ZNF425Q6IV72 752 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 LRRN1Q6UXK5 716 aa3.29□□□□□ -1.88
NEB-201ENST00000172853 OR8H3Q8N146 312 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms