RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 NANOGP1Q8N7R0 232 aa15.86■□□□□ 0.13
CTDP1-201ENST00000075430 DCAF4L2Q8NA75 395 aa15.86■□□□□ 0.13
CTDP1-201ENST00000075430 GPR32P1Q8NGA4 272 aa15.86■□□□□ 0.13
CTDP1-201ENST00000075430 HCAR2Q8TDS4 363 aa15.86■□□□□ 0.13
CTDP1-201ENST00000075430 IGSF21Q96ID5 467 aa15.86■□□□□ 0.13
CTDP1-201ENST00000075430 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 CD9P21926 228 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 MMP11P24347 488 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 VSX2P58304 361 aaPredicted RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 STXBP1P61764 594 aaKnown RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 SLC3A1Q07837 685 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 LASP1Q14847 261 aaKnown RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 SYT14P1Q58G82 188 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 C6orf120Q7Z4R8 191 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 FAM46AQ96IP4 442 aaKnown RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 SPRTNQ9H040 489 aaPredicted RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 FKBP14Q9NWM8 211 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 PATJQ8NI35 1801 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 PRR23AA6NEV1 266 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 AKAP8O43823 692 aaKnown RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 MRPS14O60783 128 aaKnown RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 SERPINI2O75830 405 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 GIPRP48546 466 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 HSDL2Q6YN16 418 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 LAS2Q8IYD9 372 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 BBS1Q8NFJ9 593 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 SETD6Q8TBK2 473 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 GCDHQ92947 438 aaPredicted RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 RIPOR3Q96MK2 946 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 SSNA1O43805 119 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 RAB36O95755 333 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 IGHA2P01877 340 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 PSMB5P28074 263 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 TOR2AQ5JU69 321 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 FAM26DQ5JW98 314 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 ZER1Q7Z7L7 766 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 CEP76Q8TAP6 659 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 CAPNS2Q96L46 248 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 SLAMF7Q9NQ25 335 aa15.85■□□□□ 0.13
CTDP1-201ENST00000075430 SPATA6Q9NWH7 488 aaPredicted RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 H2AFY2Q9P0M6 372 aaPredicted RBP15.85■□□□□ 0.13
CTDP1-201ENST00000075430 SHISA3A0PJX4 238 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 MAGEB4O15481 346 aaPredicted RBP15.84■□□□□ 0.13
CTDP1-201ENST00000075430 ENPP1P22413 925 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 HYAL4Q2M3T9 481 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 LYPLAL1Q5VWZ2 237 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 PGBD2Q6P3X8 592 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 CCDC149Q6ZUS6 474 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 CHST9Q7L1S5 443 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 ZFAND1Q8TCF1 268 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 RELTQ969Z4 430 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 ZNF558Q96NG5 402 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 SECISBP2Q96T21 854 aaKnown RBP15.84■□□□□ 0.13
CTDP1-201ENST00000075430 TAPBPLQ9BX59 468 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 OR51V1Q9H2C8 321 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 ENAMQ9NRM1 1142 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 ZCCHC3Q9NUD5 404 aaKnown RBP15.84■□□□□ 0.13
CTDP1-201ENST00000075430 GPR37L1O60883 481 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 REM1O75628 298 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 FURINP09958 794 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 ZDHHC11BP0C7U3 371 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 ACVR1BP36896 505 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 AP1S2P56377 157 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 ASAH1Q13510 395 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 BHLHB9Q6PI77 547 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 RASGEF1AQ8N9B8 481 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 RIT1Q92963 219 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 AP2M1Q96CW1 435 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 SIPA1Q96FS4 1042 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 KLF16Q9BXK1 252 aaPredicted RBP15.84■□□□□ 0.13
CTDP1-201ENST00000075430 RC3H2Q9HBD1 1191 aaKnown RBP15.84■□□□□ 0.13
CTDP1-201ENST00000075430 CNOT2Q9NZN8 540 aaKnown RBP15.84■□□□□ 0.13
CTDP1-201ENST00000075430 SH3D21A4FU49 640 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 TEX28O15482 410 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 LATO43561 262 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 MPZL2O60487 215 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 ALDH1A1P00352 501 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 TP53P04637 393 aaPredicted RBP15.84■□□□□ 0.13
CTDP1-201ENST00000075430 CDH11P55287 796 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 WNT4P56705 351 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 RHAGQ02094 409 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 GRIN2CQ14957 1233 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 ZNF630Q2M218 657 aaPredicted RBP15.84■□□□□ 0.13
CTDP1-201ENST00000075430 COMTD1Q86VU5 262 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 TEX47Q8TBZ9 253 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 RSPO3Q9BXY4 272 aaPredicted RBP15.84■□□□□ 0.13
CTDP1-201ENST00000075430 NCKAP1Q9Y2A7 1128 aa15.84■□□□□ 0.13
CTDP1-201ENST00000075430 CEP290O15078 2479 aa15.83■□□□□ 0.13
CTDP1-201ENST00000075430 TRBV5-4A0A0C4DH59 114 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 H7BY64 318 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 GATBO75879 557 aaKnown RBP15.83■□□□□ 0.12
CTDP1-201ENST00000075430 FUT1P19526 365 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 HLA-FP30511 346 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 CCR6P51684 374 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 OR10A3P58181 314 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 TAS2R41P59536 307 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 GLYR1Q49A26 553 aaPredicted RBP15.83■□□□□ 0.12
CTDP1-201ENST00000075430 SPIN4Q56A73 249 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 ZNF730Q6ZMV8 503 aa15.83■□□□□ 0.12
CTDP1-201ENST00000075430 PLEKHM3Q6ZWE6 761 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms