RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Agpat4Q8K4X7 378 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Pla2g15Q8VEB4 412 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Q91W34 466 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Hspa14Q99M31 509 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Rhox2aQ9D4Y3 191 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Olfr705Q9EPF7 316 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Skp2Q9Z0Z3 424 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Cytl1A1E5L0 139 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Zfp600A2A7V0 737 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Gm5475D3YV11 175 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Rdh8D3Z6W3 317 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Gm8879F6R3J9 157 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Zfp28P10078 825 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 FesP16879 822 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Gpx5P21765 221 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 CtskP55097 329 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Grhl3Q5FWH3 603 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Med22Q62276 200 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 GnptgQ6S5C2 307 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Adamtsl2Q7TSK7 957 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Rsbn1Q80T69 795 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Plekha8Q80W71 519 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Poglut1Q8BYB9 392 aaKnown RBP12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Gm4922Q8C0N0 497 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 CcinQ8CDE2 588 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Ddx52Q8K301 598 aaKnown RBP12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 DhrsxQ8VBZ0 335 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 BniplQ99JU7 328 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Mri1Q9CQT1 369 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 BlvraQ9CY64 295 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Emc7Q9EP72 241 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Trpv4Q9EPK8 871 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Vmn1r29Q9EQ41 303 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Atg2bQ80XK6 2075 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Fbxw9F8VPX2 458 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Gm3696K7N751 203 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 EllO08856 602 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Asna1O54984 348 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 ThpoP40226 356 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 PdxpP60487 292 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Tmem253Q3UNB8 204 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Runx1t1Q61909 577 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Serpina3aQ6P4P1 422 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Znf513Q6PD29 541 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Slc7a6Q8BGK6 515 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Klf8Q8BLM0 355 aaKnown RBP12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Adgrg7Q8BM96 785 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Aifm2Q8BUE4 373 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Irak2Q8CFA1 622 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Pcdhgb2Q91XX7 928 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Cadm3Q99N28 396 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Dnase1l2Q9D1G0 278 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Pop7Q9DCH2 140 aa12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Ak4Q9WUR9 223 aaKnown RBP12.72□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Rai1Q61818 1889 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Adamts20P59511 1906 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Ect2lA0A140LIP2 953 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Olfr1306A2BFL7 312 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Kif1cO35071 1100 aaKnown RBP12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 EvlP70429 414 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Rad51Q08297 339 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Tmem248Q3TBN1 314 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Trappc6aQ78XR0 159 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Avl9Q80U56 649 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Cstf2Q8BIQ5 580 aaKnown RBP12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Glt28d2Q8BML3 165 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Polr1eQ8K202 482 aaKnown RBP12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Stx19Q8R1Q0 292 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 RbksQ8R1Q9 323 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Sirt4Q8R216 333 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Vmn1r201Q8R262 300 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Mterf3Q8R3J4 412 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Olfr561Q8VGZ6 314 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Col25a1Q99MQ5 666 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Mtif3Q9CZD5 276 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Smim23Q9DAL0 136 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Aif1lQ9EQX4 150 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Tpk1Q9R0M5 243 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Lhx9Q9WUH2 397 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 Cpne6Q9Z140 557 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 CntrlA2AL36 2334 aa12.71□□□□□ -0.37
Rnf4-204ENSMUST00000182047 PpigA2AR02 752 aaKnown RBP12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Esp31A8R0W3 114 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Fam170bE9PXT9 378 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Gm21800J3QMJ9 180 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Fcgr3P08508 261 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Acvr2aP27038 513 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Rab8bP61028 207 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Kcnk9Q3LS21 402 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 D17Wsu92eQ3TT38 291 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Pyroxd2Q3U4I7 581 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Pin1rt1Q3ULQ2 159 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 ClpbQ60649 677 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Igsf5Q7TSN7 370 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Mrgprb5Q91ZB9 322 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Oosp1Q925U0 202 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Fis1Q9CQ92 152 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Bud23Q9CY21 281 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Khdrbs2Q9WU01 349 aa12.71□□□□□ -0.38
Rnf4-204ENSMUST00000182047 Spag17Q5S003 2320 aa12.71□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms