RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gpr62Q80UC6 358 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Azin2Q8BVM4 459 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Znf322Q8BZ89 410 aa11.46□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vmn2r13L7N1X2 831 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Bard1O70445 765 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Shc2Q8BMC3 573 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cnot4Q8BT14 575 aaKnown RBP11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cdc123Q8CII2 336 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sytl3Q99N48 607 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cyp2u1Q9CX98 530 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Per1O35973 1291 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Hcn3O88705 779 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 LpoQ5SW46 710 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Alg8Q6P8H8 526 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rhbdd3Q8BP97 385 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Trappc6bQ9D289 158 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 NagaQ9QWR8 415 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cd320Q9Z1P5 260 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Chrna1P04756 457 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slurp2P0DP59 97 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Stxbp5lQ5DQR4 1185 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc35g3Q5F297 340 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Dusp16Q6PCP3 660 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 TifaQ793I8 184 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc35f2Q7TML3 375 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Kyat1Q8BTY1 424 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sit1Q8C503 180 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ocel1Q8VCR9 219 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rab31Q921E2 194 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 AmnQ99JB7 458 aaKnown RBP11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ears2Q9CXJ1 523 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Srfbp1Q9CZ91 441 aaKnown RBP11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 GrifinQ9D1U0 144 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mrap2D3Z1Q2 207 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ces2hF6Z9B9 558 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Krtcap2Q5RL79 136 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cpa4Q6P8K8 420 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Arl3Q9WUL7 182 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Zfp68Q9Z116 606 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ankdd1aA0A1L1ST07 508 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mthfd2lD3YZG8 338 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr319L7MTY4 306 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Nudt1P53368 156 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fkbp14P59024 211 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 C1qtnf12Q8R2Z0 308 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 B4galt3Q91YY2 395 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 CutalQ9D1U5 156 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Srebf1Q9WTN3 1134 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm42688A0A0R3P9D1 673 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vmn2r115E9Q0E7 857 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1221L7MU53 311 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fubp3Q3TIX6 575 aaKnown RBP11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Zfp763Q8BIC7 588 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mpp7Q8BVD5 576 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sidt2Q8CIF6 832 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tssk6Q925K9 273 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 CrtapQ9CYD3 400 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 PmpcaQ9DC61 524 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Lrrc31F6VYM1 502 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr294F7CWV4 335 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc30a4O35149 430 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Csn1s2bP02664 143 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Olfr1101Q7TR59 310 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Abhd4Q8VD66 342 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Q99KU6 348 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Stra6lQ9DBN1 621 aa11.45□□□□□ -0.58
Trim56-201ENSMUST00000054384 Wdr76A6PWY4 622 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fam71aB7XG49 585 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mtcp1Q60945 107 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Itm2aQ61500 263 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 GanabQ8BHN3 944 aaKnown RBP11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Il36gQ8R460 164 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 St3gal4Q91Y74 333 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 MINDY3Q9CV28 444 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ppp1r35Q9D8C8 260 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sorcs1Q9JLC4 1167 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 GghQ9Z0L8 317 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cldn7Q9Z261 211 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Tmco2P0C1V4 183 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Rsu1Q01730 277 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 KcnrgQ2TUM3 264 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Dtx3lQ3UIR3 748 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Galnt12Q8BGT9 576 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Slc26a9Q8BU91 790 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Sall4Q8BX22 1067 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Kctd12bQ8C7J6 292 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ccdc142Q8CAI1 738 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Wdr37Q8CBE3 496 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Mcoln1Q99J21 580 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Kcnip1Q9JJ57 227 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cacng4Q9JJV4 327 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fthl17bA2AHC5 176 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fthl17cA2AHC6 176 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Gm4846B2RWH8 538 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Cd14P10810 366 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Vamp3P63024 103 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fthl17dQ3SXD1 176 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Fthl17fQ3SXD2 176 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Ephx3Q3V1F8 367 aa11.44□□□□□ -0.58
Trim56-201ENSMUST00000054384 Clns1aQ61189 236 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms