RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Znf518bB2RRE4 1077 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tmigd3G3X8R9 209 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dcpp3L7N259 170 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Atp5a1Q03265 553 aaKnown RBP9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tmem253Q3UNB8 204 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Lasp1Q61792 263 aaKnown RBP9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Angptl6Q8R0Z6 457 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Aco2Q99KI0 780 aaKnown RBP9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cts8Q9JI81 333 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 GltpQ9JL62 209 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Fbxo8Q9QZN3 319 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc7a5Q9Z127 512 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 SnapinQ9Z266 136 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dcaf4A0A1Y7VNZ0 532 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mthfd2lD3YZG8 338 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ring1O35730 406 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Adra2bP30545 450 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc44a5Q5RJI2 710 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nfatc2Q60591 927 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Laptm4aQ60961 233 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Lair1Q8BG84 263 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 TmieQ8K467 153 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Vmn1r229Q8R2A9 306 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Bhlhe41Q99PV5 410 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Pdzk1ip1Q9CQH0 114 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rpl14Q9CR57 217 aaKnown RBP9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 4930433I11RikA0A0U1RPT6 723 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Skint10A7TZG1 354 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Zfp735B1ARH2 734 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc22a28B2RT89 552 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Man2a1P27046 1150 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Acsl1P41216 699 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 TshrP47750 764 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Defa11P50709 85 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nr0b2Q62227 260 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr850Q8VFF2 315 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc22a30Q96LX3 552 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Wdr73Q9CWR1 371 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Il17rbQ9JIP3 499 aa9.72□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1025-ps1A0A140T8K3 312 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mettl11bB2RXM4 283 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr738L7N1X7 311 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gdf5P43027 495 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Klf1P46099 358 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 GalP47212 124 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Rit1P70426 219 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 UrodP70697 367 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Dusp2Q05922 318 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Adgrd1Q80T32 903 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Gtf2a2Q80ZM7 109 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Bri3bpQ8BXV2 253 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Unc119bQ8C4B4 251 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 D8Ertd738eQ8R1F0 94 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tmem98Q91X86 226 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Snx20Q9D2Y5 313 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Nqo2Q9JI75 231 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cpxm1Q9Z100 722 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mon2Q80TL7 1715 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 4930455H04RikD3Z622 58 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cyp2b23E9Q593 491 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 OtcP11725 354 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cpt1aP97742 773 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 ClpbQ60649 677 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Mfsd4aQ6PDC8 510 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Galnt7Q80VA0 657 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1019Q8VGS3 310 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 LhppQ9D7I5 270 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Cpn2Q9DBB9 547 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Sacm1lQ9EP69 587 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Asb1Q9WV74 336 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr74A2BHP6 318 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 5830411N06RikB3F5L4 1112 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Obox6G3X9U1 347 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Atpif1O35143 106 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Hbb-bh1P04444 147 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Ccnd3P30282 292 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Tha1Q6XPS7 400 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1418Q7TQS3 318 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr855Q7TRF8 312 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Slc43a2Q8CGA3 568 aa9.71□□□□□ -0.85
Ubr1-201ENSMUST00000028728 Olfr1193A2AV13 318 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fpr-rs4A4FUQ5 323 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 4930523C07RikE9Q2T4 99 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Il20rbE9Q9A6 308 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rras2P62071 204 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tmem69Q3KQJ0 245 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Prmt6Q6NZB1 378 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fam122bQ6NZE7 255 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pla2g15Q8VEB4 412 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pcdhga12Q91XY7 932 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gpr155A2AWR3 868 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm19965J3QNY8 723 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 TspearJ3S6Y1 670 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Prss39O70169 367 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 St3gal3P97325 374 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Anxa11P97384 503 aaKnown RBP9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sorbs2Q3UTJ2 1180 aaKnown RBP9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rnase12Q5GAM8 145 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Med26Q7TN02 588 aa9.71□□□□□ -0.86
Ubr1-201ENSMUST00000028728 MslnlQ8C160 685 aa9.71□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms