RNA–Protein interactions for RNA: ENST00000641575.1

SCN1A-219, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 BASIC

Gene SCN1A, Length 12,874 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-219ENST00000641575 IL17RCQ8NAC3 791 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 OR4A15Q8NGL6 344 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TCP10LQ8TDR4 215 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ACTL8Q9H568 366 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 REEP4Q9H6H4 257 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SLA2Q9H6Q3 261 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 IPPKQ9H8X2 491 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 C11orf16Q9NQ32 467 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PHF24Q9UPV7 400 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 AK6Q9Y3D8 172 aaKnown RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 GREB1Q4ZG55 1949 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 A0A1W2PQ09 198 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TRAPPC13A5PLN9 417 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 F8W036 122 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 I6L893 689 aaPredicted RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 K7EQS6 105 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 AKAP3O75969 853 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 OAZ2O95190 189 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CPNE6O95741 557 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 HAPLN1P10915 354 aaPredicted RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF30P17039 623 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SLC6A2P23975 617 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 BMP8BP34820 402 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 BLOC1S1P78537 153 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 NKPD1Q17RQ9 610 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 QRICH1Q2TAL8 776 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 FCRL6Q6DN72 434 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CAPN13Q6MZZ7 669 aaPredicted RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 FRRS1Q6ZNA5 592 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PIWIL3Q7Z3Z3 882 aaKnown RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 BMP8AQ7Z5Y6 402 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 GPSM1Q86YR5 675 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PDZD9Q8IXQ8 264 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 BEST4Q8NFU0 473 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SDR42E1Q8WUS8 393 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CCDC120Q96HB5 630 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 UBL7Q96S82 380 aaPredicted RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SPATC1LQ9H0A9 340 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 LHX5Q9H2C1 402 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SEC14L3Q9UDX4 400 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 NOS1P29475 1434 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 GLI2P10070 1586 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CEP295Q9C0D2 2601 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 GLOD5A6NK44 160 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 FADS2P1A8MWK0 482 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 HACD1B0YJ81 288 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TBX1O43435 398 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TULP3O75386 442 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 H6PDO95479 791 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 S1PR4O95977 384 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 GCGP01275 180 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SEC11BP0C7V7 166 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 UROSP10746 265 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 UBL4AP11441 157 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CKMT1AP12532 417 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 GTF2F2P13984 249 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF20P17024 532 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ACVR2AP27037 513 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CEACAM3P40198 252 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 HSPA7P48741 367 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 POLD2P49005 469 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 GATMP50440 423 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TIMM10P62072 90 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 IRF8Q02556 426 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ARHGAP11BQ3KRB8 267 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 FIGNQ5HY92 759 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF776Q68DI1 518 aaPredicted RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CERS6Q6ZMG9 384 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TSPAN33Q86UF1 283 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 HAS1Q92839 578 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 LRFN5Q96NI6 719 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PAPOLGQ9BWT3 736 aaKnown RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 EIF5A2Q9GZV4 153 aaKnown RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PCDHAC1Q9H158 963 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CXorf21Q9HAI6 301 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 RDH14Q9HBH5 336 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CD320Q9NPF0 282 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 PLEKHJ1Q9NW61 149 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 NLKQ9UBE8 527 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 DERAQ9Y315 318 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SLC22A23A1A5C7 686 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ABCD4O14678 606 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TP73O15350 636 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TLR5O60602 858 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TIMP2P16035 220 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CYP3A5P20815 502 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 HOXD12P35452 270 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 GYG1P46976 350 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 DGKGP49619 791 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 HNRNPFP52597 415 aaKnown RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ATP1B3P54709 279 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 TLE1Q04724 770 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 CHRNEQ04844 493 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ENPP2Q13822 863 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 KEAP1Q14145 624 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 SLC10A1Q14973 349 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 RABL3Q5HYI8 236 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 NCEH1Q6PIU2 408 aa2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ZNF705AQ6ZN79 300 aaPredicted RBP2.67□□□□□ -1.98
SCN1A-219ENST00000641575 ZCCHC9Q8N567 271 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms