RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ZCCHC12Q6PEW1 402 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 KLBQ86Z14 1044 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 BRF2Q9HAW0 419 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 PLEKHA1Q9HB21 404 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 CLEC4EQ9ULY5 219 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 IFT52Q9Y366 437 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 STRCQ7RTU9 1775 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 H7C0S8 307 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 WWP2O00308 870 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 DLGAP1O14490 977 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 CSTAP01040 98 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 ALPLP05186 524 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 HMGN2P05204 90 aaKnown RBP13.71□□□□□ -0.21
SCARB2-216ENST00000639300 TACSTD2P09758 323 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 SLC6A6P31641 620 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 MAP3K8P41279 467 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 DEFB110Q30KQ9 67 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 TMEM35AQ53FP2 167 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 PAPD5Q8NDF8 572 aaKnown RBP13.71□□□□□ -0.21
SCARB2-216ENST00000639300 DENND6BQ8NEG7 585 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 NDNFQ8TB73 568 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 NEK7Q8TDX7 302 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 FAM46AQ96IP4 442 aaKnown RBP13.71□□□□□ -0.21
SCARB2-216ENST00000639300 FRMD6Q96NE9 622 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 FAM83CQ9BQN1 747 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 DSN1Q9H410 356 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 CNIH4Q9P003 139 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 EXOSC1Q9Y3B2 195 aaKnown RBP13.71□□□□□ -0.21
SCARB2-216ENST00000639300 SCN1AP35498 2009 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 C2orf74A8MZ97 194 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 IGLV3-25P01717 112 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 MAP4K2Q12851 820 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 MAD2L1BPQ15013 274 aaPredicted RBP13.71□□□□□ -0.21
SCARB2-216ENST00000639300 SLC14A2Q15849 920 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 ZNF791Q3KP31 576 aaPredicted RBP13.71□□□□□ -0.21
SCARB2-216ENST00000639300 WDR53Q7Z5U6 358 aaPredicted RBP13.71□□□□□ -0.21
SCARB2-216ENST00000639300 NRMQ8IXM6 262 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 FANK1Q8TC84 345 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 FGF13Q92913 245 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 GPR174Q9BXC1 333 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 MOV10Q9HCE1 1003 aaKnown RBP13.71□□□□□ -0.21
SCARB2-216ENST00000639300 ENAMQ9NRM1 1142 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 ASB1Q9Y576 335 aa13.71□□□□□ -0.21
SCARB2-216ENST00000639300 ITGA10O75578 1167 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 SOX30O94993 753 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 C5AR1P21730 350 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 F8A1P23610 371 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 CLDN2P57739 230 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 ERVFC1P60507 584 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 TSPAN5P62079 268 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 ADAM8P78325 824 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 NHSL2Q5HYW2 709 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 C6orf183Q5T699 404 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 DPPA4Q7L190 304 aa13.71□□□□□ -0.22
SCARB2-216ENST00000639300 Q8N9G6 341 aaPredicted RBP13.71□□□□□ -0.22
SCARB2-216ENST00000639300 TTYH1Q9H313 450 aaPredicted RBP13.71□□□□□ -0.22
SCARB2-216ENST00000639300 ARAP2Q8WZ64 1704 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 C1orf105O95561 183 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 PCGF2P35227 344 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 MTNR1AP48039 350 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 PHC1P78364 1004 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 ARHGAP40Q5TG30 622 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 CSNK1A1LQ8N752 337 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 PJA1Q8NG27 643 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 LGR4Q9BXB1 951 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 B3GNT4Q9C0J1 378 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 EXTL2Q9UBQ6 330 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 HS3ST2Q9Y278 367 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 CD8B2A6NJW9 211 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 RNASET2O00584 256 aaKnown RBP13.7□□□□□ -0.22
SCARB2-216ENST00000639300 B4GALT3O60512 393 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 ITGBL1O95965 494 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-216ENST00000639300 CD8BP10966 210 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 OSMP13725 252 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 CERS1P27544 350 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 TGFBR2P37173 567 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 ADAM15Q13444 863 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 FAM219BQ5XKK7 198 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 OR51L1Q8NGJ5 315 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 TESCQ96BS2 214 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 MOAP1Q96BY2 351 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 HSPA12BQ96MM6 686 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 OR51E2Q9H255 320 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 KLHL31Q9H511 634 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 CWH43Q9H720 699 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 SEC61A2Q9H9S3 476 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 PRTFDC1Q9NRG1 225 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 KLHL42Q9P2K6 505 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 EIF3KQ9UBQ5 218 aaKnown RBP13.7□□□□□ -0.22
SCARB2-216ENST00000639300 CD300AQ9UGN4 299 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 TRAV6A0A075B6T7 132 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 A0A1W2PRG6 482 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 TCRBV21S2A2A0A5A6 115 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 ITGB7P26010 798 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 MC3RP41968 323 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 EIF1AXP47813 144 aaKnown RBP13.7□□□□□ -0.22
SCARB2-216ENST00000639300 CSNK1DP48730 415 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 SHC2P98077 582 aa13.7□□□□□ -0.22
SCARB2-216ENST00000639300 LRIT3Q3SXY7 679 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms