RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 MAN2A2P49641 1150 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 DAPP51397 102 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 SKP1P63208 163 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 BNC1Q01954 994 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 SIGLEC14Q08ET2 396 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 KCNAB2Q13303 367 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 COL9A2Q14055 689 aaPredicted RBP11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 GNA13Q14344 377 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 NDUFA9Q16795 377 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 KCTD21Q4G0X4 260 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 PRAMEF8Q5VWM4 474 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 PRAMEF7Q5VXH5 474 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 KDM4DQ6B0I6 523 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 CYP4Z1Q86W10 505 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 KRT73Q86Y46 540 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 SLC35F3Q8IY50 421 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 SHISA5Q8N114 240 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 NCSTNQ92542 709 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 COL26A1Q96A83 441 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 ZDHHC12Q96GR4 267 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 COL21A1Q96P44 957 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 ELF4Q99607 663 aaPredicted RBP11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 BTBD2Q9BX70 525 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 ACTRT3Q9BYD9 372 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 EPB41L1Q9H4G0 881 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 EXD2Q9NVH0 621 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 PTGFRNQ9P2B2 879 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 SH3GLB1Q9Y371 365 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 TESMINQ9Y4I5 508 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 ENPP4Q9Y6X5 453 aa11.5□□□□□ -0.57
CACNA1D-228ENST00000638120 IGHV1OR21-1A0A087WYE8 117 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 LDB3O75112 727 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 SLITRK5O94991 958 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 MED26O95402 600 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 GPR75O95800 540 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 FESP07332 822 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 IFI6P09912 130 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ITGAMP11215 1152 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ETS2P15036 469 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 GNSP15586 552 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 GLB1P16278 677 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ALDH4A1P30038 563 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 SOX18P35713 384 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 KCNJ5P48544 419 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ARRB1P49407 418 aaPredicted RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 SPIBQ01892 262 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ID2Q02363 134 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 PUM1Q14671 1186 aaKnown RBP eCLIP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 NR1D2Q14995 579 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 SHBQ15464 509 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ZNF628Q5EBL2 1059 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 NKAIN2Q5VXU1 208 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 MFSD12Q6NUT3 480 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 NIPAL1Q6NVV3 410 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 FAHD1Q6P587 224 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 TTC33Q6PID6 262 aaPredicted RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ZNF605Q86T29 641 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 C11orf74Q86VG3 221 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ZNF786Q8N393 782 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 TTC29Q8NA56 475 aaPredicted RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ZNF555Q8NEP9 628 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 OR4C15Q8NGM1 316 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 PROX1Q92786 737 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ZNF354BQ96LW1 612 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 MUS81Q96NY9 551 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 PIP5K1AQ99755 562 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 RSPO3Q9BXY4 272 aaPredicted RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 CLK4Q9HAZ1 481 aaKnown RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 PDE7BQ9NP56 450 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 EQTNQ9NQ60 294 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 SOHLH2Q9NX45 425 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 SEC14L3Q9UDX4 400 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 CLCA2Q9UQC9 943 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 A0A0A6YYC8 382 aaPredicted RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 TRIM64A6NGJ6 449 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 FAM227AF5H4B4 570 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 I3L1I5 382 aaPredicted RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 TNFRSF11BO00300 401 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 CHST10O43529 356 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 FOXS1O43638 330 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 ZBTB11O95625 1053 aaPredicted RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 CLPTM1O96005 669 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 LINGO3P0C6S8 592 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 RHCEP18577 417 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 GPR3P46089 330 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 OR1D5P58170 312 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 SRSF5Q13243 272 aaKnown RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 FAM53BQ14153 422 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 INAVAQ3KP66 663 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 TCTE1Q5JU00 501 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 FHL5Q5TD97 284 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 GARNL3Q5VVW2 1013 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 CDC73Q6P1J9 531 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 C8orf59Q8N0T1 100 aaPredicted RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 CARFQ8N187 725 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 PIK3C3Q8NEB9 887 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 GAB3Q8WWW8 586 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 AHCYL2Q96HN2 611 aaKnown RBP11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 SPATA5L1Q9BVQ7 753 aa11.49□□□□□ -0.57
CACNA1D-228ENST00000638120 CALML5Q9NZT1 146 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms