RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 MVB12AQ96EY5 273 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 PDXPQ96GD0 296 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 SGPP1Q9BX95 441 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 MS4A8Q9BY19 250 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 PCDHAC1Q9H158 963 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 CLMPQ9H6B4 373 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 ZNF304Q9HCX3 659 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 PAPOLBQ9NRJ5 636 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 KLRF1Q9NZS2 232 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 ZFR2Q9UPR6 939 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 TESMINQ9Y4I5 508 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 HMX2A2RU54 273 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 TMEM202A6NGA9 273 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 PTGES3LE9PB15 166 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 OR7A17O14581 309 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 CASC3O15234 703 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 KCNK5O95279 499 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 FADS2O95864 444 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 HPRP00739 348 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 CEACAM5P06731 702 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 ZNF888P0CJ79 500 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 C8orf89P0DMQ9 161 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 NPPBP16860 134 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 MAOBP27338 520 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 RYKP34925 604 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 PEX19P40855 299 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 FOLR3P41439 243 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 GPR143P51810 404 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 ZNF41P51814 821 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 PLCXD2Q0VAA5 305 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 CLPPQ16740 277 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 ZIK1Q3SY52 487 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 UBAP2Q5T6F2 1119 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 CPZQ66K79 652 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 NAV3Q8IVL0 2385 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 BPIFB6Q8NFQ5 453 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 PNPLA2Q96AD5 504 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 TBC1D20Q96BZ9 403 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 MAELQ96JY0 434 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 CCM2LQ9NUG4 571 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 GIMAP2Q9UG22 337 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 U3KQV3 271 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 ZNF860A6NHJ4 632 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 A8MUA0 341 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 H0YGG7 62 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 hCG_2039718K7EN88 272 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 ZNF821O75541 412 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 AHSA1O95433 338 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 DCNP07585 359 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 HSMCR30P0CW71 290 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 LAMP1P11279 417 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 PGCP20142 388 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 GMPRP36959 345 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 PGGT1BP53609 377 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 EMP2P54851 167 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 PFN3P60673 137 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 ARF3P61204 181 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 COLEC12Q5KU26 742 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 WIPI1Q5MNZ9 446 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 TMEM215Q68D42 235 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 BMP8AQ7Z5Y6 402 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 LGI4Q8N135 537 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 ARL14Q8N4G2 192 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 EID2Q8N6I1 236 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 TP53I13Q8NBR0 393 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 KBTBD8Q8NFY9 601 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 C9orf43Q8TAL5 461 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 SLC37A2Q8TED4 501 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 JPH3Q8WXH2 748 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 CCDC115Q96NT0 180 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 SLC30A3Q99726 388 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 LYRM4Q9HD34 91 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 CUTCQ9NTM9 273 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 CLEC1BQ9P126 229 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 RPL36Q9Y3U8 105 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 TDRD15B5MCY1 1934 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 POM121BA6NF01 834 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 EFCAB10A6NFE3 127 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 RTCAO00442 366 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 FAAHO00519 579 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 OR6B1O95007 311 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 CD160O95971 181 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 RENP00797 406 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 MTHFD2P13995 350 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 NME1P15531 152 aaKnown RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 GLB1P16278 677 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 RHCEP18577 417 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 GABRA3P34903 492 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 KIR2DL1P43626 348 aaPredicted RBP5.23□□□□□ -1.57
CHD2-227ENST00000637572 SLC6A8P48029 635 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 SMSP52788 366 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 MC1RQ01726 317 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 TARDBPQ13148 414 aaKnown RBP eCLIP5.23□□□□□ -1.578e-8■■■■■ 27.3
CHD2-227ENST00000637572 CCINQ13939 588 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 MFSD13AQ14CX5 517 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.23□□□□□ -1.57
CHD2-227ENST00000637572 DCAF12Q5T6F0 453 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 RNF165Q6ZSG1 346 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 TRIM73Q86UV7 250 aa5.23□□□□□ -1.57
CHD2-227ENST00000637572 LAS2Q8IYD9 372 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms