RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 BCAP29Q9UHQ4 241 aa17.46■□□□□ 0.39
CLN6-221ENST00000637494 NPFFR2Q9Y5X5 522 aa17.46■□□□□ 0.39
CLN6-221ENST00000637494 GTF3C1Q12789 2109 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 TRGV5A0A0B4J1U4 118 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 A0A1B0GVC2 190 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 AQP7O14520 342 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 GLRA3O75311 464 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 ENO1P06733 434 aaKnown RBP17.45■□□□□ 0.38
CLN6-221ENST00000637494 CHRNB4P30926 498 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 PRKAA2P54646 552 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 GALNT1Q10472 559 aaPredicted RBP17.45■□□□□ 0.38
CLN6-221ENST00000637494 RPS6KA2Q15349 733 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 SPIN4Q56A73 249 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 ZNF585AQ6P3V2 769 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 EIF1ADQ8N9N8 165 aaKnown RBP17.45■□□□□ 0.38
CLN6-221ENST00000637494 C17orf47Q8NEP4 570 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 OR5M9Q8NGP3 310 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 UBLCP1Q8WVY7 318 aaPredicted RBP17.45■□□□□ 0.38
CLN6-221ENST00000637494 TM4SF18Q96CE8 201 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 L3HYPDHQ96EM0 354 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 ZNF597Q96LX8 424 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 SECISBP2Q96T21 854 aaKnown RBP17.45■□□□□ 0.38
CLN6-221ENST00000637494 HBEGFQ99075 208 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 PPCSQ9HAB8 311 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 MCM8Q9UJA3 840 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 ZNF225Q9UK10 706 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 CHCHD2Q9Y6H1 151 aaPredicted RBP17.45■□□□□ 0.38
CLN6-221ENST00000637494 CACNA1DQ01668 2161 aa17.45■□□□□ 0.38
CLN6-221ENST00000637494 NCOA6Q14686 2063 aaPredicted RBP17.44■□□□□ 0.38
CLN6-221ENST00000637494 GNG14A0A1W2PPG7 69 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 A0A1W2PS29 197 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 CLPSP04118 112 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 ATP1B1P05026 303 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 CT62P0C5K7 136 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 MYL2P10916 166 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 PRF1P14222 555 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 ACVR2AP27037 513 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 TNFRSF8P28908 595 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 FEN1P39748 380 aaKnown RBP17.44■□□□□ 0.38
CLN6-221ENST00000637494 ACSM2AQ08AH3 577 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 PMPCAQ10713 525 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 ACSM2BQ68CK6 577 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 SAMD14Q8IZD0 417 aaPredicted RBP17.44■□□□□ 0.38
CLN6-221ENST00000637494 LRRC25Q8N386 305 aaPredicted RBP17.44■□□□□ 0.38
CLN6-221ENST00000637494 CCNYL1Q8N7R7 359 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 ZNF615Q8N8J6 731 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 ZNF441Q8N8Z8 693 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 CHTF18Q8WVB6 975 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 TXLNGYQ9BZA5 131 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 PNPLA3Q9NST1 481 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 GIMAP4Q9NUV9 329 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 UTS2RQ9UKP6 389 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 CES1P1Q9UKY3 287 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 LIPGQ9Y5X9 500 aa17.44■□□□□ 0.38
CLN6-221ENST00000637494 ANKRD33BA6NCL7 494 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 H3BQF6 201 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 PCDH7O60245 1069 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 WDR1O75083 606 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 CDH16O75309 829 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 CRCPO75575 148 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 SNX4O95219 450 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 HOXD4P09016 255 aaPredicted RBP17.43■□□□□ 0.38
CLN6-221ENST00000637494 DRD2P14416 443 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 GDF1P27539 372 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 CCT5P48643 541 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 MASP1P48740 699 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 MAP4K2Q12851 820 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 HEPACAMQ14CZ8 416 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 CCDC153Q494R4 210 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 EMC4Q5J8M3 183 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 TCHHL1Q5QJ38 904 aaPredicted RBP17.43■□□□□ 0.38
CLN6-221ENST00000637494 B3GNT6Q6ZMB0 384 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 PACS2Q86VP3 889 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 LURAP1LQ8IV03 231 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 CCDC63Q8NA47 563 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 OR10Q1Q8NGQ4 319 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 ZNF703Q9H7S9 590 aaPredicted RBP17.43■□□□□ 0.38
CLN6-221ENST00000637494 ALKBH4Q9NXW9 302 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 PRODH2Q9UF12 536 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 CNOT11Q9UKZ1 510 aaKnown RBP17.43■□□□□ 0.38
CLN6-221ENST00000637494 GRID1Q9ULK0 1009 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 RNF6Q9Y252 685 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 HRH3Q9Y5N1 445 aa17.43■□□□□ 0.38
CLN6-221ENST00000637494 NBPF19A0A087WUL8 3843 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 FAM47E-STBD1D6RA91 191 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 BCAS2O75934 225 aaPredicted RBP17.42■□□□□ 0.38
CLN6-221ENST00000637494 LRATO95237 230 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 CELA3AP09093 270 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 GABRA1P14867 456 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 GPX3P22352 226 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 SSTR2P30874 369 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 GSTM5P46439 218 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 FBXW4P57775 412 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 CDSNQ15517 529 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 IMPG1Q17R60 797 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 PRICKLE4Q2TBC4 344 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 CFAP157Q5JU67 520 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 TMEM64Q6YI46 380 aa17.42■□□□□ 0.38
CLN6-221ENST00000637494 GSPT2Q8IYD1 628 aaKnown RBP17.42■□□□□ 0.38
CLN6-221ENST00000637494 MARVELD2Q8N4S9 558 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms