RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 AK4P27144 223 aaPredicted RBP12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 LIPJQ5W064 366 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 DBF4BQ8NFT6 615 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 GOLGA2P5Q9HBQ8 144 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 CTPS2Q9NRF8 586 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 INMT-MINDY4F8WBC2 141 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 VILLO15195 856 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 HBQ1P09105 142 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 NDUFV2P19404 249 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 BDKRB2P30411 391 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 HK3P52790 923 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 FAPQ12884 760 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 HACD2Q6Y1H2 254 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 GOLGA7Q7Z5G4 137 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 DNAJC22Q8N4W6 341 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 BEST4Q8NFU0 473 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 JOSD2Q8TAC2 188 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 SLC22A14Q9Y267 594 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 A0A096LPI6 279 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 A6NCN8 305 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 RNH1P13489 461 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 LYSMD3Q7Z3D4 306 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 TMEM246Q9BRR3 403 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 MAGIXQ9H6Y5 334 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 TPT1P8Q9HAU6 139 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 POPDC3Q9HBV1 291 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 BIN3Q9NQY0 253 aa12.63□□□□□ -0.39
SYNGAP1-208ENST00000629380 C6orf47O95873 294 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 UCHL1P09936 223 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 ADH7P40394 386 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 HNRNPKP61978 463 aaKnown RBP eCLIP12.62□□□□□ -0.392e-6■■■□□ 15.7
SYNGAP1-208ENST00000629380 CYP1B1Q16678 543 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 EARS2Q5JPH6 523 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 HGSNATQ68CP4 663 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 RBPJLQ9UBG7 517 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 LATO43561 262 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 ALDOBP05062 364 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 NIPAL4Q0D2K0 466 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 CAMK2DQ13557 499 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 NADK2Q4G0N4 442 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 AGAP7PQ5VUJ5 663 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 AGAP6Q5VW22 663 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 TMPRSS9Q7Z410 1059 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 ZNF280BQ86YH2 543 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 ELMOD2Q8IZ81 293 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 PYROXD2Q8N2H3 581 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 ZNF681Q96N22 645 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 AGAP4Q96P64 663 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 AMBNQ9NP70 447 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 CHD3Q12873 2000 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 SOWAHBA6NEL2 793 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 EEDO75530 441 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 OR8U9P0C7N5 309 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 CD9P21926 228 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 ZC3H14Q6PJT7 736 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 DPY19L4Q7Z388 723 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 IQCF1Q8N6M8 205 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 FAM156AQ8NDB6 213 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 KIAA1191Q96A73 305 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 HIF1ANQ9NWT6 349 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 ZNF407Q9C0G0 2248 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 GRXCR1A8MXD5 290 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 GPR37L1O60883 481 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 RAET1LQ5VY80 246 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 EEF1DP3Q658K8 133 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 TXNDC15Q96J42 360 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 BTF3L4Q96K17 158 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 ARL5BQ96KC2 179 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 TRAPPC13A5PLN9 417 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 OR5K4A6NMS3 321 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 KLF11O14901 512 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 TSFMP43897 325 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 PREPP48147 710 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 GSK3BP49841 420 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 C6orf141Q5SZD1 244 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 PAQR3Q6TCH7 311 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 LRRC25Q8N386 305 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 TRMT10AQ8TBZ6 339 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 NDRG1Q92597 394 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 RPF2Q9H7B2 306 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 ITGB4P16144 1822 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 PORP16435 677 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 MR1Q95460 341 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 SECISBP2Q96T21 854 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 WNK2Q9Y3S1 2297 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 C4BPAP04003 597 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 ZNF92Q03936 586 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 STC1P52823 247 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 CCNJQ5T5M9 372 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 GLIS3Q8NEA6 775 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 CDC6Q99741 560 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 DOHHQ9BU89 302 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 CDH20Q9HBT6 801 aa12.62□□□□□ -0.39
SYNGAP1-208ENST00000629380 SLC16A5O15375 505 aa12.61□□□□□ -0.39
SYNGAP1-208ENST00000629380 CSTAP01040 98 aa12.61□□□□□ -0.39
SYNGAP1-208ENST00000629380 DDCP20711 480 aa12.61□□□□□ -0.39
SYNGAP1-208ENST00000629380 DNASE1P24855 282 aa12.61□□□□□ -0.39
SYNGAP1-208ENST00000629380 TMEM53Q6P2H8 277 aa12.61□□□□□ -0.39
SYNGAP1-208ENST00000629380 RNF111Q6ZNA4 994 aa12.61□□□□□ -0.39
SYNGAP1-208ENST00000629380 CYP4V2Q6ZWL3 525 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms