RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	SEC14L4	Q9UDX3	406 aa		13.26	□□□□□ -0.29
NRXN1-222	ENST00000625672	ZNF451	Q9Y4E5	1061 aa		13.26	□□□□□ -0.29
NRXN1-222	ENST00000625672	ACVR1B	P36896	505 aa		13.26	□□□□□ -0.29
NRXN1-222	ENST00000625672	KCNC4	Q03721	635 aa		13.26	□□□□□ -0.29
NRXN1-222	ENST00000625672	ZNF423	Q2M1K9	1284 aa		13.26	□□□□□ -0.29
NRXN1-222	ENST00000625672	C6orf183	Q5T699	404 aa		13.26	□□□□□ -0.29
NRXN1-222	ENST00000625672	RABEPK	Q7Z6M1	372 aa		13.26	□□□□□ -0.29
NRXN1-222	ENST00000625672	ZNF559	Q9BR84	538 aa		13.26	□□□□□ -0.29
NRXN1-222	ENST00000625672	HERPUD2	Q9BSE4	406 aa		13.26	□□□□□ -0.29
NRXN1-222	ENST00000625672	PTRH2	Q9Y3E5	179 aa	Known RBP	13.26	□□□□□ -0.29
NRXN1-222	ENST00000625672	MYH6	P13533	1939 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	EFCAB7	A8K855	629 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	PRAMEF11	O60813	436 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	EIF4E	P06730	217 aa	Known RBP	13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	FES	P07332	822 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	HSD17B7	P56937	341 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	SHC2	P98077	582 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	SLC27A4	Q6P1M0	643 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	TUBA3E	Q6PEY2	450 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	NIPA2	Q8N8Q9	360 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	OR5H2	Q8NGV7	314 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	NEIL3	Q8TAT5	605 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	TXNDC15	Q96J42	360 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	ZNF681	Q96N22	645 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	LGALS13	Q9UHV8	139 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	C1orf226	A1L170	272 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	ANKRD30BL	A7E2S9	258 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	ELAVL3	Q14576	367 aa	Known RBP	13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	PRAMEF8	Q5VWM4	474 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	PRAMEF7	Q5VXH5	474 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	OR51T1	Q8NGJ9	327 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	ADAMTS18	Q8TE60	1221 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	IL1A	P01583	271 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	C1GALT1C1L	P0DN25	315 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	AGTR2	P50052	363 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	TBPL1	P62380	186 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	PIGG	Q5H8A4	983 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	EMC10	Q5UCC4	262 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	LEG1	Q6P5S2	330 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	OR52E2	Q8NGJ4	325 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	RNF186	Q9NXI6	227 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	AHSG	P02765	367 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	PABPC4L	P0CB38	370 aa	Known RBP	13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	ACRV1	P26436	265 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	CHRNE	Q04844	493 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	OR4N5	Q8IXE1	308 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	LIN37	Q96GY3	246 aa	Predicted RBP	13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	EXTL2	Q9UBQ6	330 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	LCHN	A4D1U4	455 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	FPR1	P21462	350 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	ADH6	P28332	368 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	GABRA2	P47869	451 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	RUNX3	Q13761	415 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	ZNF675	Q8TD23	568 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	HHIP	Q96QV1	700 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	CNN2	Q99439	309 aa	Known RBP	13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	LMAN1L	Q9HAT1	526 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	EEF1E1	O43324	174 aa	Known RBP	13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	ZNF780A	O75290	641 aa	Predicted RBP	13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	C5AR1	P21730	350 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	STC1	P52823	247 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	ARSF	P54793	590 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	ABHD18	Q0P651	414 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	POU4F2	Q12837	409 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	MAMDC2	Q7Z304	686 aa	Predicted RBP	13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	PHC2	Q8IXK0	858 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	NDNF	Q8TB73	568 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	SCAMP4	Q969E2	229 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	KIF1A	Q12756	1690 aa		13.25	□□□□□ -0.29
NRXN1-222	ENST00000625672	TMEM11	P17152	192 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	DEFB110	Q30KQ9	67 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	OR4C11	Q6IEV9	310 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	RPS27L	Q71UM5	84 aa	Known RBP	13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	FBXL8	Q96CD0	374 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	LRFN1	Q9P244	771 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	CEL	P19835	753 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	PRKACG	P22612	351 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	SOX9	P48436	509 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	OLIG2	Q13516	323 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	KHDC1	Q4VXA5	237 aa	Known RBP	13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	MSI2	Q96DH6	328 aa	Known RBP	13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	MYEF2	Q9P2K5	600 aa	Known RBP	13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	RNF6	Q9Y252	685 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	GSR	P00390	522 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	STEAP3	Q658P3	488 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	SLC5A8	Q8N695	610 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	HS6ST2	Q96MM7	605 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	ADAMTS10	Q9H324	1103 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	FAM118A	Q9NWS6	357 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	CD207	Q9UJ71	328 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	CD8B2	A6NJW9	211 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	TULP2	O00295	520 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	CD8B	P10966	210 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	RAB11B	Q15907	218 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	TCTE1	Q5JU00	501 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	LIPK	Q5VXJ0	399 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	MEDAG	Q5VYS4	303 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	LYSMD4	Q5XG99	296 aa		13.24	□□□□□ -0.29
NRXN1-222	ENST00000625672	RPLP0P6	Q8NHW5	317 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms