RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 DSCAMO60469 2012 aa13.38□□□□□ -0.27
PNKP-218ENST00000625299 STAB1Q9NY15 2570 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 GOLGA6L10A0A0M3HER8 536 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 C2orf72A6NCS6 295 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 SIAH2O43255 324 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 SMNDC1O75940 238 aaKnown RBP eCLIP13.37□□□□□ -0.27
PNKP-218ENST00000625299 RCBTB2O95199 551 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 GPR75O95800 540 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 ACTL6AO96019 429 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 KRT15P19012 456 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 FPR1P21462 350 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 PTPN6P29350 595 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 CDC25BP30305 580 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 PCDH1Q08174 1060 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 MGAT5Q09328 741 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 OR4D1Q15615 310 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 ACKR1Q16570 336 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 STEAP4Q687X5 459 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 TIGD3Q6B0B8 471 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 PRSS57Q6UWY2 283 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 ZNF441Q8N8Z8 693 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 OR7G3Q8NG95 312 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 OR1J4Q8NGS1 313 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 OR14L1PQ8NHC6 308 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 RDH11Q8TC12 318 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 UBE2E3Q969T4 207 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 RGMAQ96B86 450 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 TMEM41AQ96HV5 264 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 ZFP3Q96NJ6 502 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 SECISBP2Q96T21 854 aaKnown RBP13.37□□□□□ -0.27
PNKP-218ENST00000625299 CENPKQ9BS16 269 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 PIGMQ9H3S5 423 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 CAB39LQ9H9S4 337 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 PACSIN3Q9UKS6 424 aa13.37□□□□□ -0.27
PNKP-218ENST00000625299 PLPP1O14494 284 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 PHGDHO43175 533 aaKnown RBP13.36□□□□□ -0.27
PNKP-218ENST00000625299 CTIFO43310 598 aaKnown RBP13.36□□□□□ -0.27
PNKP-218ENST00000625299 CCDC166P0CW27 439 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 NR2F6P10588 404 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 CASP2P42575 452 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 RPS13P62277 151 aaKnown RBP13.36□□□□□ -0.27
PNKP-218ENST00000625299 TBCCQ15814 346 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 NNATQ16517 81 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 DEPDC1Q5TB30 811 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 LRRC70Q7Z2Q7 622 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 MYLK4Q86YV6 388 aaPredicted RBP13.36□□□□□ -0.27
PNKP-218ENST00000625299 LAS2Q8IYD9 372 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 UCN3Q969E3 161 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 TP53INP1Q96A56 240 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 FAM111AQ96PZ2 611 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 MED18Q9BUE0 208 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 ACBD3Q9H3P7 528 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 POPDC3Q9HBV1 291 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 SERHLQ9NQF3 203 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 RYDENQ9NUL5 291 aaKnown RBP13.36□□□□□ -0.27
PNKP-218ENST00000625299 RNF112Q9ULX5 631 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 MAPRE3Q9UPY8 281 aa13.36□□□□□ -0.27
PNKP-218ENST00000625299 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
PNKP-218ENST00000625299 A0A1W2PS29 197 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 A8MXE2 369 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 DEFB108AA8MXU0 73 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 PIAS1O75925 651 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 CNOT4O95628 575 aaKnown RBP13.35□□□□□ -0.27
PNKP-218ENST00000625299 CD1DP15813 335 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 EPB42P16452 691 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 STARP49675 285 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 FAM27E3Q08E93 113 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 DESI1Q6ICB0 168 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 CYP20A1Q6UW02 462 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 ENPP6Q6UWR7 440 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 GRAMD2AQ8IUY3 354 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 GALNT12Q8IXK2 581 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 ZCCHC7Q8N3Z6 543 aaKnown RBP13.35□□□□□ -0.27
PNKP-218ENST00000625299 PDPRQ8NCN5 879 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 HUS1BQ8NHY5 278 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 WNT2BQ93097 391 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 NTNG2Q96CW9 530 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 ZC3HAV1LQ96H79 300 aaKnown RBP13.35□□□□□ -0.27
PNKP-218ENST00000625299 WFIKKN1Q96NZ8 548 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 MTERF1Q99551 399 aaKnown RBP13.35□□□□□ -0.27
PNKP-218ENST00000625299 CD244Q9BZW8 370 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 DDX47Q9H0S4 455 aaKnown RBP13.35□□□□□ -0.27
PNKP-218ENST00000625299 RHOJQ9H4E5 214 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 WDR41Q9HAD4 459 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 GALNT9Q9HCQ5 603 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 ZNF226Q9NYT6 803 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 PTBP2Q9UKA9 531 aaKnown RBP13.35□□□□□ -0.27
PNKP-218ENST00000625299 MTO1Q9Y2Z2 717 aaKnown RBP13.35□□□□□ -0.27
PNKP-218ENST00000625299 TEX264Q9Y6I9 313 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 HEATR5AQ86XA9 2040 aa13.35□□□□□ -0.27
PNKP-218ENST00000625299 A0A1W2PR48 441 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 TMPRSS11DO60235 418 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 EEDO75530 441 aaKnown RBP13.34□□□□□ -0.27
PNKP-218ENST00000625299 AIFM1O95831 613 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 CT62P0C5K7 136 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 SLC35E2BP0CK96 405 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 SLC35E2P0CK97 266 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 NID1P14543 1247 aa13.34□□□□□ -0.27
PNKP-218ENST00000625299 CPN1P15169 458 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms