RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 POU2F1P14859 743 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 MAP2K4P45985 399 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 MASP1P48740 699 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 CCR5P51681 352 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 FUT5Q11128 374 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 FCRL6Q6DN72 434 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 FIGLAQ6QHK4 219 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 SLC16A12Q6ZSM3 486 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 ANKRD13BQ86YJ7 626 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 FLCNQ8NFG4 579 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 MSANTD3Q96H12 275 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 SMIM10Q96HG1 83 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 SPATA5L1Q9BVQ7 753 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 IRAK4Q9NWZ3 460 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 ENPP5Q9UJA9 477 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 TRBV4-1A0A0J9YWV2 114 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 GSAPA4D1B5 854 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 CHRM4P08173 479 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 RANBP1P43487 201 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 SYT6Q5T7P8 510 aaPredicted RBP18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 KLHL17Q6TDP4 642 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 DGLUCYQ7Z3D6 616 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 RBM45Q8IUH3 476 aaKnown RBP18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 OR10G6Q8NH81 332 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 VANGL1Q8TAA9 524 aaPredicted RBP18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 ELP4Q96EB1 424 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 THAP11Q96EK4 314 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 OTUB1Q96FW1 271 aaPredicted RBP18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 C10orf90Q96M02 699 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 YIPF4Q9BSR8 244 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 BTBD2Q9BX70 525 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 C3orf14Q9HBI5 128 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 POT1Q9NUX5 634 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 PILRAQ9UKJ1 303 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 TMCC3Q9ULS5 477 aa18.57■□□□□ 0.56
PCDHB11-202ENST00000624887 OXSR1O95747 527 aaPredicted RBP18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 H1F0P07305 194 aaKnown RBP18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 GABRB1P18505 474 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 ELAVL4P26378 380 aaKnown RBP18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 BUD31P41223 144 aaPredicted RBP18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 IDH2P48735 452 aaKnown RBP18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 SNRPNP63162 240 aaKnown RBP18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 DCTN2Q13561 401 aaKnown RBP18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 SUZ12Q15022 739 aaKnown RBP18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 PRAMEF8Q5VWM4 474 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 PRAMEF7Q5VXH5 474 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 KIAA0895LQ68EN5 471 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 DEF8Q6ZN54 512 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 AHSA2Q719I0 299 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 LACC1Q8IV20 430 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 CCDC103Q8IW40 242 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 OR9A2Q8NGT5 310 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 KLHL6Q8WZ60 621 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 WFDC6Q9BQY6 131 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 GSDMCQ9BYG8 508 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 POLMQ9NP87 494 aaPredicted RBP18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 ACOT13Q9NPJ3 140 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 ZNF226Q9NYT6 803 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 KCMF1Q9P0J7 381 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 CPNE7Q9UBL6 633 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 PHF11Q9UIL8 331 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 KLK4Q9Y5K2 254 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 ENTPD2Q9Y5L3 495 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 SCN3AQ9NY46 2000 aa18.56■□□□□ 0.56
PCDHB11-202ENST00000624887 A0A0G2JPF8 293 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 A0A0J9YVX5 310 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 URADA6NGE7 173 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 HNRNPCL2B2RXH8 293 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 HNRNPCL3B7ZW38 293 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 P2RX6O15547 441 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 ADAP00813 363 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 HNRNPCL4P0DMR1 293 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 ZNF182P17025 639 aaPredicted RBP18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 MC3RP41968 323 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 STT3AP46977 705 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 SMIM11AP58511 58 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 TNFRSF17Q02223 184 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 RELAQ04206 551 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 PTGES3Q15185 160 aaKnown RBP18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 DCST1Q5T197 706 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 COMTD1Q86VU5 262 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 NUP43Q8NFH3 380 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 PATE1Q8WXA2 126 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 C16orf58Q96GQ5 468 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 SERINC2Q96SA4 455 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 TCEAL2Q9H3H9 227 aaPredicted RBP18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 FTSJ1Q9UET6 329 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 PSORS1C1Q9UIG5 152 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 FAM221BA6H8Z2 402 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 FAAHO00519 579 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 ASNA1O43681 348 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 UBE2IP63279 158 aaKnown RBP18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 HPCAP84074 193 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 FOXD4Q12950 439 aaPredicted RBP18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 SEC23BQ15437 767 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 CCDC81Q6ZN84 652 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 FAM92BQ6ZTR7 304 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 DNAJC22Q8N4W6 341 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 PPP1R14BQ96C90 147 aa18.55■□□□□ 0.56
PCDHB11-202ENST00000624887 TOE1Q96GM8 510 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms