RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 SLITRK5O94991 958 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SOX14O95416 240 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 DNTTP04053 509 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 HSMCR30P0CW71 290 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 HOXB3P14651 431 aaPredicted RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 CMPK1P30085 196 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 PEBP1P30086 187 aaKnown RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 GRK5P34947 590 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TSFMP43897 325 aaKnown RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SLC15A1P46059 708 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 PRKAG1P54619 331 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TARDBPQ13148 414 aaKnown RBP eCLIP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 PIN1Q13526 163 aaPredicted RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 LRRC32Q14392 662 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 GPR19Q15760 415 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 PERM1Q5SV97 790 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 C12orf73Q69YU5 71 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 PARM1Q6UWI2 310 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 FBXL6Q8N531 539 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 AMER2Q8N7J2 671 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 MINDY2Q8NBR6 621 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SRFBP1Q8NEF9 429 aaKnown RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 KBTBD8Q8NFY9 601 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 OR56A1Q8NGH5 318 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SLC7A13Q8TCU3 470 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 FGF14Q92915 247 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 FAM131CQ96AQ9 280 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 DACH2Q96NX9 599 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 IL4I1Q96RQ9 567 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TRMT61BQ9BVS5 477 aaKnown RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 FNDC11Q9BVV2 318 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 POLR2J3Q9H1A7 115 aaKnown RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 ARMC7Q9H6L4 198 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 FZD3Q9NPG1 666 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SPHK1Q9NYA1 384 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TAS2R16Q9NYV7 291 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 FBXW2Q9UKT8 454 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 ENTPD4Q9Y227 616 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SLC9A8Q9Y2E8 581 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 PCDHGA3Q9Y5H0 932 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 HEBP2Q9Y5Z4 205 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 COLEC10Q9Y6Z7 277 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 A3GALT2U3KPV4 340 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TBC1D3DA0A087WVF3 549 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TBC1D3IA0A087WXS9 549 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TBC1D3EA0A087X179 549 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TBC1D3KA0A087X1G2 549 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 A0A0G2JPF8 293 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 LOC100506127A0A0U1RQW1 187 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 A0A1W2PRQ8 180 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TBC1D3FA6NER0 549 aaPredicted RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 HNRNPCL2B2RXH8 293 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 HNRNPCL3B7ZW38 293 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TBC1D3LB9A6J9 549 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 M0R3H8 397 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 ENTPD6O75354 484 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 AIFM1O95831 613 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 IGFBP1P08833 259 aaPredicted RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TBC1D3HP0C7X1 549 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 HNRNPCL4P0DMR1 293 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 MAT2AP31153 395 aaKnown RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 PPP5CP53041 499 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 LIMK1P53667 647 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 ADPRHP54922 357 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 IFITM3Q01628 133 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SHHQ15465 462 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 MED22Q15528 200 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TMEM201Q5SNT2 666 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TBC1D3GQ6DHY5 549 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TBC1D3CQ6IPX1 549 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 PODNL1Q6PEZ8 512 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 CASP12Q6UXS9 341 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 COMTD1Q86VU5 262 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 CCDC116Q8IYX3 515 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 TBC1D3Q8IZP1 549 aaPredicted RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 LINC00471Q8N535 108 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 MFSD9Q8NBP5 474 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 WDR36Q8NI36 951 aaKnown RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SUN3Q8TAQ9 357 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 CNRIP1Q96F85 164 aaPredicted RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SCARF2Q96GP6 870 aaPredicted RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 MGLLQ99685 303 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 YIPF4Q9BSR8 244 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 OR51E2Q9H255 320 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 KIR3DX1Q9H7L2 352 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 CCDC59Q9P031 241 aaKnown RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SCHIP1Q9P0W5 487 aaPredicted RBP7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 CES1P1Q9UKY3 287 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SNX7Q9UNH6 387 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 PCDHGA4Q9Y5G9 962 aa7.85□□□□□ -1.15
SND1-IT1-201ENST00000623342 SCAMP1O15126 338 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 NME6O75414 186 aaPredicted RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 LGI1O95970 557 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 HMGN2P05204 90 aaKnown RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 FHP07954 510 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 CHRM4P08173 479 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 ADRA2AP08913 450 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 ALPPL2P10696 532 aa7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 DBTP11182 482 aaKnown RBP7.84□□□□□ -1.15
SND1-IT1-201ENST00000623342 F3P13726 295 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms