RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 PITHD1Q9GZP4 211 aaPredicted RBP5.47□□□□□ -1.53
LINC00963-215ENST00000622972 REXO4Q9GZR2 422 aaKnown RBP5.47□□□□□ -1.53
LINC00963-215ENST00000622972 IQCGQ9H095 443 aaKnown RBP5.47□□□□□ -1.53
LINC00963-215ENST00000622972 RNF32Q9H0A6 362 aa5.47□□□□□ -1.53
LINC00963-215ENST00000622972 CDCP1Q9H5V8 836 aa5.47□□□□□ -1.53
LINC00963-215ENST00000622972 NECTIN3Q9NQS3 549 aa5.47□□□□□ -1.53
LINC00963-215ENST00000622972 MARCOQ9UEW3 520 aaPredicted RBP5.47□□□□□ -1.53
LINC00963-215ENST00000622972 ENTPD4Q9Y227 616 aa5.47□□□□□ -1.53
LINC00963-215ENST00000622972 TRAF6Q9Y4K3 522 aa5.47□□□□□ -1.53
LINC00963-215ENST00000622972 ATG4BQ9Y4P1 393 aa5.47□□□□□ -1.53
LINC00963-215ENST00000622972 COL12A1Q99715 3063 aa5.47□□□□□ -1.53
LINC00963-215ENST00000622972 DIDO1Q9BTC0 2240 aaKnown RBP5.47□□□□□ -1.53
LINC00963-215ENST00000622972 MYO7BQ6PIF6 2116 aa5.47□□□□□ -1.53
LINC00963-215ENST00000622972 PCNX3Q9H6A9 2034 aa5.47□□□□□ -1.53
LINC00963-215ENST00000622972 HIVEP3Q5T1R4 2406 aa5.46□□□□□ -1.53
LINC00963-215ENST00000622972 A0A1W2PQ72 361 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ANKDD1BA6NHY2 528 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 GLOD5A6NK44 160 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 TMEM114B3SHH9 223 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 NPIPA5E9PKD4 350 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 NPIPB8E9PQR5 432 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 HRKO00198 91 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 FCHO1O14526 889 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 KLF11O14901 512 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 PGRMC2O15173 223 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 FGF17O60258 216 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 SLC19A2O60779 497 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 SEMA3DO95025 777 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 AIFM1O95831 613 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 CLPSP04118 112 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 FHP07954 510 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 GSTP1P09211 210 aaKnown RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 UROSP10746 265 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 RNH1P13489 461 aaKnown RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 COX6B1P14854 86 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 SDC1P18827 310 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 MAOAP21397 527 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 PRPH2P23942 346 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 HTR1EP28566 365 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 NOS3P29474 1203 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 CD96P40200 585 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ARL1P40616 181 aaPredicted RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 CA7P43166 264 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ZFP36L2P47974 494 aaKnown RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 SMSP52788 366 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 SLC26A5P58743 744 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 GUCY1A3Q02108 690 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ID2Q02363 134 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 CSTF3Q12996 717 aaKnown RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 DUSP8Q13202 625 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 STX3Q13277 289 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 TUBA3CQ13748 450 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 PDCD2Q16342 344 aaPredicted RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 RFTN2Q52LD8 501 aaPredicted RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ZNF385BQ569K4 471 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 PAGE2BQ5JRK9 111 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 HHATQ5VTY9 493 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ZNF324BQ6AW86 544 aaPredicted RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 SPINK14Q6IE38 97 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 OR4C11Q6IEV9 310 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 SLC25A25Q6KCM7 469 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 FDX2Q6P4F2 183 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 TUBA3EQ6PEY2 450 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 RPTNQ6XPR3 784 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 RNF165Q6ZSG1 346 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 FAM47EQ6ZV65 393 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 GALNTL5Q7Z4T8 443 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 RPS19BP1Q86WX3 136 aaKnown RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 SCUBE1Q8IWY4 988 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ZNF321PQ8N8H1 164 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 PLPP5Q8NEB5 264 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 THAP3Q8WTV1 239 aaPredicted RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 RELTQ969Z4 430 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ATP6V1E2Q96A05 226 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ANKRD9Q96BM1 317 aaPredicted RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 CMTM7Q96FZ5 175 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 CCDC120Q96HB5 630 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 PPP1R36Q96LQ0 422 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 SIGLEC12Q96PQ1 595 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 OR1F2PQ96R84 312 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 OR52B2Q96RD2 323 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 EBF4Q9BQW3 602 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 TRMOQ9BU70 441 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 CAPS2Q9BXY5 557 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 HES7Q9BYE0 225 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 DEFB126Q9BYW3 111 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ELOVL6Q9H5J4 265 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 DDX31Q9H8H2 851 aaKnown RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 BRF2Q9HAW0 419 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 MMP25Q9NPA2 562 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 PNO1Q9NRX1 252 aaKnown RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 SIRT5Q9NXA8 310 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 PSD3Q9NYI0 1048 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 LRFN1Q9P244 771 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 MID2Q9UJV3 735 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 TINAGQ9UJW2 476 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 ZNF223Q9UK11 482 aaPredicted RBP5.46□□□□□ -1.54
LINC00963-215ENST00000622972 FBXW2Q9UKT8 454 aa5.46□□□□□ -1.54
LINC00963-215ENST00000622972 CES1P1Q9UKY3 287 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms