RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 OR7G2Q8NG99 324 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 ZNF675Q8TD23 568 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 MOAP1Q96BY2 351 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 ECSITQ9BQ95 431 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 CRB3Q9BUF7 120 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 CXorf21Q9HAI6 301 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 DDX18Q9NVP1 670 aaKnown RBP16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 MAT2BQ9NZL9 334 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 CORO2BQ9UQ03 480 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 AHCTF1Q8WYP5 2266 aa16.66■□□□□ 0.26
PTCHD3-202ENST00000622555 PLOD2O00469 737 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 SLITRK5O94991 958 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 CT62P0C5K7 136 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 PRKAG1P54619 331 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 LIPEQ05469 1076 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 CEACAM7Q14002 265 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 PIGGQ5H8A4 983 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 SAXO2Q658L1 398 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 C6orf120Q7Z4R8 191 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 FBXW8Q8N3Y1 598 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 OR56A1Q8NGH5 318 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 NEURL3Q96EH8 262 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 PIF1Q9H611 641 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 EPS8L2Q9H6S3 715 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 ANKRA2Q9H9E1 313 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 PTGFRNQ9P2B2 879 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 NKX1-2Q9UD57 310 aaPredicted RBP16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 AP3M1Q9Y2T2 418 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 PRORSD1PA6NEY8 169 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 A8MUA0 341 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 ALOX12BO75342 701 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 TCN1P20061 433 aaPredicted RBP16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 GALNSP34059 522 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 CASP9P55211 416 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 EEFSECP57772 596 aaKnown RBP16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 MGAT2Q10469 447 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 MAP7Q14244 749 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 TRMT12Q53H54 448 aaKnown RBP16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 PGM2L1Q6PCE3 622 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 BHLHB9Q6PI77 547 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 LANCL3Q6ZV70 420 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 IFNEQ86WN2 208 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 RNF130Q86XS8 419 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 HPS6Q86YV9 775 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 NLGN4XQ8N0W4 816 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 VWA5B2Q8N398 1253 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 NUP43Q8NFH3 380 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 NLGN4YQ8NFZ3 816 aaPredicted RBP16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 OR10A6Q8NH74 314 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 CT55Q8WUE5 264 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 METTL21AQ8WXB1 218 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 CCDC124Q96CT7 223 aaKnown RBP16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 RAD21L1Q9H4I0 556 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 KAT8Q9H7Z6 458 aaKnown RBP16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 GMPR2Q9P2T1 348 aaKnown RBP16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 PTRH2Q9Y3E5 179 aaKnown RBP16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 GMEB1Q9Y692 573 aa16.65■□□□□ 0.26
PTCHD3-202ENST00000622555 SYNDIG1LA6NDD5 238 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 C17orf105B2RV13 164 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 STMND1H3BQB6 276 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 UPK1AO00322 258 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 ENTPD5O75356 428 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 CD63P08962 238 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 GPX2P18283 190 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 TCN2P20062 427 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 SOX18P35713 384 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 CRATP43155 626 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 PGDP52209 483 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 MAP4K2Q12851 820 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 ZNF267Q14586 743 aaPredicted RBP16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 RGNQ15493 299 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 COX20Q5RI15 118 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 FAM69BQ5VUD6 431 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 NET1Q7Z628 596 aaPredicted RBP16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 OR2L13Q8N349 312 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 FAM156AQ8NDB6 213 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 OR52N2Q8NGI0 321 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 WDR60Q8WVS4 1066 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 CTHRC1Q96CG8 243 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 SLC35G5Q96KT7 338 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 CNPPD1Q9BV87 410 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 ALG2Q9H553 416 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 DCLRE1BQ9H816 532 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 ADAP2Q9NPF8 381 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 CD300AQ9UGN4 299 aa16.64■□□□□ 0.25
PTCHD3-202ENST00000622555 CFAP54Q96N23 3096 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 A0A087WV62 115 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 CDRT15L2A8MXV6 281 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 PLOD3O60568 738 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 RAD1O60671 282 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 SORBS2O94875 1100 aaKnown RBP16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 CYC1P08574 325 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 ME2P23368 584 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 FOLR3P41439 243 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 GSK3BP49841 420 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 OR4D2P58180 307 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 RPS26P62854 115 aaKnown RBP16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 VAC14Q08AM6 782 aa16.63■□□□□ 0.25
PTCHD3-202ENST00000622555 KPNB1Q14974 876 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms