RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 AP1M2Q9Y6Q5 423 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 NUP210Q8TEM1 1887 aaPredicted RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 AQP12BA6NM10 295 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 TNFRSF11BO00300 401 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 HMGN4O00479 90 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 PROM1O43490 865 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 PRICKLE3O43900 615 aaPredicted RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 BCAS1O75363 584 aaPredicted RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 DCTP40126 519 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 PDX1P52945 283 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 MYBPC1Q00872 1141 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 ZNF155Q12901 538 aaPredicted RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 GRIK2Q13002 908 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 EXOC3L2Q2M3D2 409 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 PROSER1Q86XN7 944 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 AQP12AQ8IXF9 295 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 EID3Q8N140 333 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 CLIP4Q8N3C7 705 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 CADM2Q8N3J6 435 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 TMEM105Q8N8V8 129 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 CAMKVQ8NCB2 501 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 OR4D11Q8NGI4 311 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 SUN3Q8TAQ9 357 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 PHF10Q8WUB8 498 aaKnown RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 ELF4Q99607 663 aaPredicted RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 NIPSNAP1Q9BPW8 284 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 MYNNQ9NPC7 610 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 SEMA3GQ9NS98 782 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 SPATA7Q9P0W8 599 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 WARS2Q9UGM6 360 aaKnown RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 DAPP1Q9UN19 280 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 RELNP78509 3460 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 A0A0J9YY10 115 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 FAM221BA6H8Z2 402 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 UPK1AO00322 258 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 TIAF1O95411 115 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 NME1P15531 152 aaKnown RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 ACADSP16219 412 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 NDUFS1P28331 727 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 MVDP53602 400 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 HPCAP84074 193 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 DMPKQ09013 629 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 ZNF425Q6IV72 752 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 RASGRP3Q8IV61 690 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 SLC5A8Q8N695 610 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 BAHD1Q8TBE0 780 aaPredicted RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 PROX1Q92786 737 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 MARCH7Q9H992 704 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 C1GALT1Q9NS00 363 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 FGF21Q9NSA1 209 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 SIRT3Q9NTG7 399 aaPredicted RBP9.89□□□□□ -0.83
VPS11-208ENST00000621676 CNIH4Q9P003 139 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 PSME2Q9UL46 239 aa9.89□□□□□ -0.83
VPS11-208ENST00000621676 A0A0A6YYD5 115 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 A0A1W2PR77 199 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 C1orf226A1L170 272 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 HYKKA2RU49 373 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 LRRN3E7EW58 273 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 H3BSH0 61 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 NUDT14O95848 222 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 RPLP0P05388 317 aaKnown RBP9.88□□□□□ -0.83
VPS11-208ENST00000621676 HSMCR30P0CW71 290 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 PRG2P13727 222 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 TRPC1P48995 793 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 ARHGDIAP52565 204 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 SLC16A1P53985 500 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 STARD6P59095 220 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 NAA20P61599 178 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 PRPF38BQ5VTL8 546 aaKnown RBP9.88□□□□□ -0.83
VPS11-208ENST00000621676 HACD2Q6Y1H2 254 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 LANCL3Q6ZV70 420 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 ARMC8Q8IUR7 673 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 C1orf210Q8IVY1 113 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 DENND6BQ8NEG7 585 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 COQ8BQ96D53 544 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 CCDC115Q96NT0 180 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 QRFPRQ96P65 431 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 DEPDC7Q96QD5 511 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 OR6C1Q96RD1 312 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 LRRN3Q9H3W5 708 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 PELI2Q9HAT8 420 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 PDE7BQ9NP56 450 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 TRPV5Q9NQA5 729 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 POT1Q9NUX5 634 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 ANKRD10Q9NXR5 420 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 CTSFQ9UBX1 484 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 TRBV5-3A0A0A0MS03 114 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 TRBV4-1A0A0J9YWV2 114 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 RNASET2O00584 256 aaKnown RBP9.88□□□□□ -0.83
VPS11-208ENST00000621676 TNFRSF10CO14798 259 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 ACOX3O15254 700 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 KDM1AO60341 852 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 CCNDBP1O95273 360 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 FESP07332 822 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 CHRM4P08173 479 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 GNSP15586 552 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 GPX2P18283 190 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 CSF2RBP32927 897 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 HSD17B2P37059 387 aa9.88□□□□□ -0.83
VPS11-208ENST00000621676 NXPH1P58417 271 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms