RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TMC8Q8IU68 726 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 PHC2Q8IXK0 858 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 PEX5LQ8IYB4 626 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 POMGNT2Q8NAT1 580 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SLC43A3Q8NBI5 491 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SLC37A3Q8NCC5 494 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 FAM46DQ8NEK8 389 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 DNAJB8Q8NHS0 232 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 RNF170Q96K19 258 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 FERD3LQ96RJ6 166 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 NELL2Q99435 816 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SPATA5L1Q9BVQ7 753 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 PRR14Q9BWN1 585 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 MKRN2Q9H000 416 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SLITRK2Q9H156 845 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 OR51V1Q9H2C8 321 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 PPIL3Q9H2H8 161 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 OR10H1Q9Y4A9 318 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SLC30A4O14863 429 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 STC2O76061 302 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 POP4O95707 220 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 DHFRP00374 187 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SCG5P05408 212 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 RHOP08100 348 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SSTR2P30874 369 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 ETV6P41212 452 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 ASMTP46597 345 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 EIF4HQ15056 248 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SLC35F1Q5T1Q4 408 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 FAM205BPQ63HN1 556 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 MTFR2Q6P444 385 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 CNIH2Q6PI25 160 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 TMEM220Q6QAJ8 160 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 HUS1BQ8NHY5 278 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 ADAMTS15Q8TE58 950 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 FATE1Q969F0 183 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 MRPL48Q96GC5 212 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 MSANTD3Q96H12 275 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 TMEM80Q96HE8 168 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 MED30Q96HR3 178 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 SPACA7Q96KW9 195 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 WFDC6Q9BQY6 131 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 FAM120CQ9NX05 1096 aaKnown RBP6.61□□□□□ -1.35
NEDD9-216ENST00000620854 ZSCAN32Q9NX65 697 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 GULP1Q9UBP9 304 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 MAPRE3Q9UPY8 281 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 PADI2Q9Y2J8 665 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 WNT6Q9Y6F9 365 aa6.61□□□□□ -1.35
NEDD9-216ENST00000620854 TSPAN4O14817 238 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 SCAMP2O15127 329 aaKnown RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 TGM5O43548 720 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 GMFGO60234 142 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 OR10H2O60403 315 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 MRPS14O60783 128 aaKnown RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 ATG13O75143 517 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 TSPAN9O75954 239 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 PRNPP04156 253 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 SEMG1P04279 462 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 BCHEP06276 602 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 NSG1P42857 185 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 MAP2K3P46734 347 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 XKP51811 444 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 RPS25P62851 125 aaKnown RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 ZNF91Q05481 1191 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 POU4F3Q15319 338 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 SEC23BQ15437 767 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 LCN1P1Q5VSP4 162 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 MED27Q6P2C8 311 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 BHLHB9Q6PI77 547 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 CXXC5Q7LFL8 322 aaKnown RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 TMEM173Q86WV6 379 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 CREB3L4Q8TEY5 395 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 ZBED6CLQ96FA7 236 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 LRR1Q96L50 414 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 SLC22A12Q96S37 553 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 PIP5K1AQ99755 562 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 C3orf14Q9HBI5 128 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 NPAP1Q9NZP6 1156 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 LHX3Q9UBR4 397 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 CLEC4EQ9ULY5 219 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 STUB1Q9UNE7 303 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 RUVBL1Q9Y265 456 aaKnown RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 FNDC1Q4ZHG4 1894 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 MN1Q10571 1320 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 WASHC1A8K0Z3 465 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 CHURC1-FNTBB4DL54 471 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 H7C0S8 307 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 LEFTY2O00292 366 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 FABP7O15540 132 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 KLK1P06870 262 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 HNRNPA1P09651 372 aaKnown RBP eCLIP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 ZNF250P15622 560 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 HOXB9P17482 250 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 ATF4P18848 351 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 ATF6P18850 670 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 IDSP22304 550 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 ALAS2P22557 587 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 ERP29P30040 261 aaKnown RBP6.6□□□□□ -1.35
NEDD9-216ENST00000620854 ETV5P41161 510 aa6.6□□□□□ -1.35
NEDD9-216ENST00000620854 BDKRB1P46663 353 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms