RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 SLC35E2BP0CK96 405 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 IL4RP24394 825 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 ACADVLP49748 655 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 PGGT1BP53609 377 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 SLC7A9P82251 487 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 CHRFAM7AQ494W8 412 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 MEDAGQ5VYS4 303 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 MAMDC2Q7Z304 686 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 NEDD4LQ96PU5 975 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 NANSQ9NR45 359 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 NUFIP1Q9UHK0 495 aaKnown RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 MKLN1Q9UL63 735 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 CLEC4EQ9ULY5 219 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 TTLL8A6PVC2 850 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 ABLIM1O14639 778 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 RFPL1O75677 317 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 DNASE1L3Q13609 305 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 SLC27A4Q6P1M0 643 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 LRFN4Q6PJG9 635 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 TMED4Q7Z7H5 227 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 TRAPPC6BQ86SZ2 158 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 FBXL8Q96CD0 374 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 TRMT2BQ96GJ1 504 aaKnown RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 DPH2Q9BQC3 489 aaPredicted RBP10.84□□□□□ -0.67
CLIP1-219ENST00000620786 ACTRT3Q9BYD9 372 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 TOR3AQ9H497 397 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 EHD1Q9H4M9 534 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 SRPK3Q9UPE1 567 aa10.84□□□□□ -0.67
CLIP1-219ENST00000620786 A0A0A6YYC8 382 aaPredicted RBP10.83□□□□□ -0.67
CLIP1-219ENST00000620786 C13orf42A0A1B0GVH6 325 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 KANTRA0A1W2PQU2 76 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 H3BML4 177 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 I3L1I5 382 aaPredicted RBP10.83□□□□□ -0.67
CLIP1-219ENST00000620786 PEPDP12955 493 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 DCKP27707 260 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 SFTPDP35247 375 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 WNT7BP56706 349 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 RBPJQ06330 500 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 MEP1AQ16819 746 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 ANKRD54Q6NXT1 300 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 SHQ1Q6PI26 577 aaKnown RBP10.83□□□□□ -0.67
CLIP1-219ENST00000620786 RAB11FIP2Q7L804 512 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 ERMP1Q7Z2K6 904 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 OR8H1Q8NGG4 311 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 OR52E1Q8NGJ3 308 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 WDR20Q8TBZ3 569 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 FRS2Q8WU20 508 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 TM9SF4Q92544 642 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 PGAP3Q96FM1 320 aaPredicted RBP10.83□□□□□ -0.67
CLIP1-219ENST00000620786 SLC22A4Q9H015 551 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 C1orf21Q9H246 121 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 TMA7Q9Y2S6 64 aaKnown RBP10.83□□□□□ -0.67
CLIP1-219ENST00000620786 CDH10Q9Y6N8 788 aa10.83□□□□□ -0.67
CLIP1-219ENST00000620786 A0A0U1RQS6 177 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 SLC16A8O95907 504 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 HOXB9P17482 250 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-219ENST00000620786 GJA8P48165 433 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 EIF5AP63241 154 aaKnown RBP10.83□□□□□ -0.68
CLIP1-219ENST00000620786 NAT6Q93015 286 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 SLC12A9Q9BXP2 914 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 FKBP14Q9NWM8 211 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 SPO11Q9Y5K1 396 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 CD63P08962 238 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 ZNF43P17038 809 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 GDF1P27539 372 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 GNRHRP30968 328 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 ADH7P40394 386 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 RIDAP52758 137 aaKnown RBP10.83□□□□□ -0.68
CLIP1-219ENST00000620786 RPL19P84098 196 aaKnown RBP10.83□□□□□ -0.68
CLIP1-219ENST00000620786 KANK2Q63ZY3 851 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 PROKR1Q8TCW9 393 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 KIF13AQ9H1H9 1805 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 SMIM30A4D0T7 59 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 J3QRK9 145 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 FLRT2O43155 660 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 ITIH1P19827 911 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 GPR4P46093 362 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 MVKQ03426 396 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 BNIP3Q12983 259 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 KIR2DS3Q14952 304 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 VMACQ2NL98 169 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 WSCD2Q2TBF2 565 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 MARCH8Q5T0T0 291 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 HOXB13Q92826 284 aaPredicted RBP10.83□□□□□ -0.68
CLIP1-219ENST00000620786 ISG20Q96AZ6 181 aaKnown RBP10.83□□□□□ -0.68
CLIP1-219ENST00000620786 DTD2Q96FN9 168 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 OR5B2Q96R09 309 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 OR10A4Q9H209 315 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 TMEM185BQ9H7F4 350 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 PDLIM7Q9NR12 457 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 VNN2O95498 520 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 TIMP2P16035 220 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 GJA4P35212 333 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 MAZP56270 477 aaKnown RBP10.83□□□□□ -0.68
CLIP1-219ENST00000620786 MANEAQ5SRI9 462 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 KCTD9Q7L273 389 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 C3orf58Q8NDZ4 430 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 DENND6BQ8NEG7 585 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 OSBPL7Q9BZF2 842 aa10.83□□□□□ -0.68
CLIP1-219ENST00000620786 MED11Q9P086 117 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms