RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TMEM205Q6UW68 189 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 FAM198BQ6UWH4 519 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 TMEM107Q6UX40 140 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 DNAJC14Q6Y2X3 702 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 DGAT2L6Q6ZPD8 337 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 SHISA6Q6ZSJ9 500 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 C6orf120Q7Z4R8 191 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 TMEM151BQ8IW70 566 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 NLGN4XQ8N0W4 816 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 CLEC4FQ8N1N0 589 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 KIF2BQ8N4N8 673 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 NLGN4YQ8NFZ3 816 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 OR2Y1Q8NGV0 311 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 SFXN5Q8TD22 340 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 PTPMT1Q8WUK0 201 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 METTL21AQ8WXB1 218 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 KAT2AQ92830 837 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 TSLPQ969D9 159 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 MOAP1Q96BY2 351 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 FAM122AQ96E09 287 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 NEURL3Q96EH8 262 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 FAM120BQ96EK7 910 aaKnown RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 AURKBQ96GD4 344 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 ZNF578Q96N58 590 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 CPPED1Q9BRF8 314 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 SLC35A5Q9BS91 424 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 THUMPD3Q9BV44 507 aaKnown RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 GPR87Q9BY21 358 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 IKZF5Q9H5V7 419 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 SOX17Q9H6I2 414 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 SPAG4Q9NPE6 437 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 ASCL3Q9NQ33 180 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 ADA2Q9NZK5 511 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 MAT2BQ9NZL9 334 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 PTGFRNQ9P2B2 879 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 ABCD2Q9UBJ2 740 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 CD300AQ9UGN4 299 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 ZNF639Q9UID6 485 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 C3orf18Q9UK00 162 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 ACSL6Q9UKU0 697 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 C19orf53Q9UNZ5 99 aaPredicted RBP7.5□□□□□ -1.21
CPNE3-209ENST00000620393 L3MBTL1Q9Y468 752 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 NEUROG3Q9Y4Z2 214 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 SPEGQ15772 3267 aa7.5□□□□□ -1.21
CPNE3-209ENST00000620393 CNOT1A5YKK6 2376 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 SCN3AQ9NY46 2000 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 RNF103-CHMP3A0A140T963 221 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 TRABD2BA6NFA1 517 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 C17orf105B2RV13 164 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 C21orf140B9A014 251 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 STMND1H3BQB6 276 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 UPK1AO00322 258 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 PCDH17O14917 1159 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 DYRK3O43781 588 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 DNAJA2O60884 412 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 BCAS2O75934 225 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 IGHEP01854 428 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 C1QCP02747 245 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 UMODP07911 640 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 CT62P0C5K7 136 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 PTGER1P34995 402 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 SOAT1P35610 550 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 CHI3L1P36222 383 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 MC3RP41968 323 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 MAGEA8P43361 318 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 GZMMP51124 257 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 MMP16P51512 607 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 SLC7A2P52569 658 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 MVDP53602 400 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 PRKAG1P54619 331 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 EEFSECP57772 596 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 FOXL2P58012 376 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 OR4D2P58180 307 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 MTPNP58546 118 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 RPS15P62841 145 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 MRPS35P82673 323 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 PRR5P85299 388 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 VAC14Q08AM6 782 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 FUT7Q11130 342 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 GAB1Q13480 694 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 SELPLGQ14242 412 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 ZNF267Q14586 743 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 SSPNQ14714 243 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 RGNQ15493 299 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 ELAVL1Q15717 326 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 PIGGQ5H8A4 983 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 RABL3Q5HYI8 236 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 SAMD4BQ5PRF9 694 aaKnown RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 FHL5Q5TD97 284 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 SAXO2Q658L1 398 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 ZNF787Q6DD87 383 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 ZCCHC12Q6PEW1 402 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
CPNE3-209ENST00000620393 ANKRD37Q7Z713 158 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 CALHM3Q86XJ0 350 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 DTX1Q86Y01 620 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 GALNT12Q8IXK2 581 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 OR2L13Q8N349 312 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 FBXW8Q8N3Y1 598 aa7.49□□□□□ -1.21
CPNE3-209ENST00000620393 ENDOVQ8N8Q3 282 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms