RNA–Protein interactions for RNA: ENST00000620175.4

SYN2-205, Transcript of synapsin II, humanhuman

TSL 1 (best) BASIC

Gene SYN2, Length 3,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-205ENST00000620175 CDK20Q8IZL9 346 aa13.42□□□□□ -0.26
SYN2-205ENST00000620175 GCDHQ92947 438 aaPredicted RBP13.42□□□□□ -0.26
SYN2-205ENST00000620175 OTUB2Q96DC9 234 aa13.42□□□□□ -0.26
SYN2-205ENST00000620175 DNAJA3Q96EY1 480 aa13.42□□□□□ -0.26
SYN2-205ENST00000620175 PGAP3Q96FM1 320 aaPredicted RBP13.42□□□□□ -0.26
SYN2-205ENST00000620175 WRAP53Q9BUR4 548 aaKnown RBP13.42□□□□□ -0.26
SYN2-205ENST00000620175 THSD1Q9NS62 852 aa13.42□□□□□ -0.26
SYN2-205ENST00000620175 KLHL21Q9UJP4 597 aa13.42□□□□□ -0.26
SYN2-205ENST00000620175 PCDHGB1Q9Y5G3 927 aa13.42□□□□□ -0.26
SYN2-205ENST00000620175 A0A1B0GVM2 712 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 LEUTXA8MZ59 168 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 SCG5P05408 212 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 PTX3P26022 381 aaPredicted RBP13.41□□□□□ -0.26
SYN2-205ENST00000620175 RPL4P36578 427 aaKnown RBP13.41□□□□□ -0.26
SYN2-205ENST00000620175 SSR2P43308 183 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 SSX1Q16384 188 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 RAET1GQ6H3X3 334 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 CYB561A3Q8NBI2 242 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 CD99L2Q8TCZ2 262 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 SNX33Q8WV41 574 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 FBXW5Q969U6 566 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 EPYCQ99645 322 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 TREM1Q9NP99 234 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 FER1L6Q2WGJ9 1857 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 ARAP2Q8WZ64 1704 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 ANHXE9PGG2 379 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 IL3P08700 152 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 OSMP13725 252 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 AMD1P17707 334 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 SOX18P35713 384 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 ETV3P41162 512 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 SOX2P48431 317 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 ZNF140P52738 457 aaPredicted RBP13.41□□□□□ -0.26
SYN2-205ENST00000620175 SF3A2Q15428 464 aaKnown RBP13.41□□□□□ -0.26
SYN2-205ENST00000620175 FXNQ16595 210 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 C18orf63Q68DL7 685 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 C3P1Q6ZMU1 363 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 RTL4Q6ZR62 310 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 OR5D16Q8NGK9 328 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 ARSGQ96EG1 525 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 TMEM19Q96HH6 336 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 PKMYT1Q99640 499 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 BARHL1Q9BZE3 327 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 IMP3Q9NV31 184 aaKnown RBP13.41□□□□□ -0.26
SYN2-205ENST00000620175 MARK1Q9P0L2 795 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 PHF11Q9UIL8 331 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 A0A0A6YYJ9 748 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 MEIS3P1A6NDR6 274 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 PROM1O43490 865 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 HNF1BP35680 557 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 GJA5P36382 358 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 FKBP1BP68106 108 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 MGAT3Q09327 533 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 GAB1Q13480 694 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 OR6K6Q8NGW6 343 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 GIMAP1Q8WWP7 306 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 NKD1Q969G9 470 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 DCLRE1CQ96SD1 692 aaKnown RBP13.41□□□□□ -0.26
SYN2-205ENST00000620175 ZNF471Q9BX82 626 aaPredicted RBP13.41□□□□□ -0.26
SYN2-205ENST00000620175 QRSL1Q9H0R6 528 aaKnown RBP13.41□□□□□ -0.26
SYN2-205ENST00000620175 RNF208Q9H0X6 261 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 PIGUQ9H490 435 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 ZNF768Q9H5H4 540 aaKnown RBP13.41□□□□□ -0.26
SYN2-205ENST00000620175 RC3H2Q9HBD1 1191 aaKnown RBP13.41□□□□□ -0.26
SYN2-205ENST00000620175 B3GNT2Q9NY97 397 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 FBXW2Q9UKT8 454 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 CACNG2Q9Y698 323 aa13.41□□□□□ -0.26
SYN2-205ENST00000620175 ITGA3P26006 1051 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 MAP2K6P52564 334 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 CDH4P55283 916 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 ERVK-21P61565 698 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 ARHGAP15Q53QZ3 475 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 FAM27D1Q5T7N8 215 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 SLC27A4Q6P1M0 643 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 TMEM88Q6PEY1 159 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 FAM180AQ6UWF9 173 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 Q6ZVL8 140 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 ZNF566Q969W8 418 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 MYEOVQ96EZ4 313 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 IFT27Q9BW83 186 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 NIPAL2Q9H841 368 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 AK6Q9Y3D8 172 aaKnown RBP13.4□□□□□ -0.26
SYN2-205ENST00000620175 UBR3Q6ZT12 1888 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 CEP350Q5VT06 3117 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 ARPC1BO15143 372 aaKnown RBP13.4□□□□□ -0.26
SYN2-205ENST00000620175 GMFGO60234 142 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 RASGRP1O95267 797 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 SHC1P29353 583 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 ETV5P41161 510 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 ETV1P50549 477 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 MAP2K5Q13163 448 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 GPR176Q14439 515 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 IHHQ14623 411 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 ZBTB37Q5TC79 503 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 BRAT1Q6PJG6 821 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 TMEM220Q6QAJ8 160 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 FRRS1Q6ZNA5 592 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 WDR53Q7Z5U6 358 aaPredicted RBP13.4□□□□□ -0.26
SYN2-205ENST00000620175 TAF8Q7Z7C8 310 aa13.4□□□□□ -0.26
SYN2-205ENST00000620175 ZFP82Q8N141 532 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms