RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 DGKGP49619 791 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 RBBP4Q09028 425 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 SEC23BQ15437 767 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 ZNF772Q68DY9 489 aaPredicted RBP12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 UBE2R2Q712K3 238 aaPredicted RBP12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 OR6S1Q8NH40 331 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 OR56B4Q8NH76 319 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 NT5C3BQ969T7 300 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 KIAA1143Q96AT1 154 aaPredicted RBP12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 C1orf74Q96LT6 269 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 SLC19A3Q9BZV2 496 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 CAPN10Q9HC96 672 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 TSTD3H0UI37 97 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 STK25O00506 426 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 PRICKLE3O43900 615 aaPredicted RBP12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 GBAP04062 536 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 ETFAP13804 333 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 SMPD1P17405 629 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 DAOAP59103 153 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 DYRK1AQ13627 763 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 TRAM2Q15035 370 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 ETFDHQ16134 617 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 FAM124AQ86V42 546 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 WDR20Q8TBZ3 569 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 OPALINQ96PE5 141 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 EPYCQ99645 322 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 ATP13A1Q9HD20 1204 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 SLC6A20Q9NP91 592 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 RCE1Q9Y256 329 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 SLC6A5Q9Y345 797 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 A0A1B0GUL6 1792 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 ABHD14A-ACY1A0A1B0GW23 586 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 CASTOR2A6NHX0 329 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 LRRC72A6NJI9 287 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 SPARCP09486 303 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 CXCL3P19876 107 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 RAP2BP61225 183 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 SORDQ00796 357 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 IRF5Q13568 498 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 AGMOQ6ZNB7 445 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 LIX1LQ8IVB5 337 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 FBXO16Q8IX29 292 aaPredicted RBP12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 CLDN19Q8N6F1 224 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 MINDY3Q9H8M7 445 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 V9GYH0 126 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 C13orf42A0A1B0GVH6 325 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 ASPDHA6ND91 283 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 F5H5T6 163 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 ZNF30P17039 623 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 SERPINA12Q8IW75 414 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 REPS2Q8NFH8 660 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 SFT2D1Q8WV19 159 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 ATOH8Q96SQ7 321 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 PCDHB9Q9Y5E1 797 aa12.92□□□□□ -0.34
PPP4R3B-205ENST00000616288 FAM227AF5H4B4 570 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 GPR171O14626 319 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 IRF1P10914 325 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 MTAPQ13126 283 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 TUSC3Q13454 348 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 ZNF697Q5TEC3 545 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 OR7G2Q8NG99 324 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 EXOSC1Q9Y3B2 195 aaKnown RBP12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 F5H5P2 479 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 B4GALT3O60512 393 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 CFDP00746 253 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 LPLP06858 475 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 SNRNP70P08621 437 aaKnown RBP12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 MTNR1AP48039 350 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 MANFP55145 182 aaKnown RBP12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 RHOAP61586 193 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 CHAF1BQ13112 559 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 GBX1Q14549 363 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 C9orf57Q5W0N0 161 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 METAP1DQ6UB28 335 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 HMGN2P46Q86SG4 172 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 ZFP42Q96MM3 310 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 KATNB1Q9BVA0 655 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 SGK2Q9HBY8 427 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 HEBP1Q9NRV9 189 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 ZNF282Q9UDV7 671 aaPredicted RBP12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 FAM74A7A6NL05 159 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 H3BSH0 61 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 H7C0S8 307 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 IFNA4P05014 189 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 EDN1P05305 212 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 SCGB2B2Q4G0G5 96 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 FAM74A3Q4VXF1 159 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 ADAM5Q6NVV9 412 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 IQCHQ86VS3 1027 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 MEX3DQ86XN8 651 aaKnown RBP12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 COPS5Q92905 334 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 ARL11Q969Q4 196 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 NTAN1Q96AB6 310 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 C14orf79Q96F83 325 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 BTBD1Q9H0C5 482 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 CBY1Q9Y3M2 126 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 PCDHB11Q9Y5F2 797 aa12.91□□□□□ -0.34
PPP4R3B-205ENST00000616288 A0A0B4J203 849 aa12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 SAP18O00422 153 aaKnown RBP12.9□□□□□ -0.34
PPP4R3B-205ENST00000616288 KRT33AO76009 404 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms