RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 CLDN11O75508 207 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 HLA-DPB1P04440 258 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 EPHX1P07099 455 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 NR2F1P10589 423 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 JUPP14923 745 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 IDSP22304 550 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 SPAM1P38567 509 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 NSG1P42857 185 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 XCR1P46094 333 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 MTNR1AP48039 350 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 MANFP55145 182 aaKnown RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 CDH4P55283 916 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 LIM2P55344 173 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 ERVFC1P60507 584 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 OC90Q02509 493 aaPredicted RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 FGL2Q14314 439 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 MFSD13AQ14CX5 517 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 KCNA10Q16322 511 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 FAM27D1Q5T7N8 215 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 NDUFAF5Q5TEU4 345 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 SMARCD3Q6STE5 483 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 LYPD4Q6UWN0 246 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 LRRC70Q7Z2Q7 622 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 GPR142Q7Z601 462 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 UBE2Q1Q7Z7E8 422 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 OR8J2Q8NGG1 315 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 OR8K5Q8NH50 307 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 TEX47Q8TBZ9 253 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 RAET1EQ8TD07 263 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 CLP1Q92989 425 aaKnown RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 MSLNLQ96KJ4 702 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 GSX2Q9BZM3 304 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 KCNK12Q9HB15 430 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 ASIC5Q9NY37 505 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 CDH10Q9Y6N8 788 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 ARID1AO14497 2285 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 IGLV3-10A0A075B6K4 115 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 MBLAC1A4D2B0 266 aaPredicted RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 FAM183AA6NL82 134 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 L7N2F9 121 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 SMAD6O43541 496 aaKnown RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 TRIM3O75382 744 aaPredicted RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 SEMG1P04279 462 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 ALPPL2P10696 532 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 FNTBP49356 437 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 DGKGP49619 791 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 CDH11P55287 796 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 WDR5P61964 334 aaKnown RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 MTAPQ13126 283 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 IRF5Q13568 498 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 TUSC1Q2TAM9 212 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 CCSMST1Q4G0I0 132 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 SYT14P1Q58G82 188 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 ZNF628Q5EBL2 1059 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 ESPNLQ6ZVH7 1005 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 GPR135Q8IZ08 494 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 PGBD3Q8N328 593 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 CPA6Q8N4T0 437 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 MS4A15Q8N5U1 240 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 ZNF366Q8N895 744 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 ZNF527Q8NB42 609 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 GPR26Q8NDV2 337 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 OR4K5Q8NGD3 323 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 OR52N2Q8NGI0 321 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 OR51G2Q8NGK0 314 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 OR6M1Q8NGM8 313 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 BBS10Q8TAM1 723 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 ZNF671Q8TAW3 534 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 EXOSC8Q96B26 276 aaKnown RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 TEFMQ96QE5 360 aaKnown RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 OR4K3Q96R72 315 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 SECISBP2Q96T21 854 aaKnown RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 DDOQ99489 341 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 C2orf49Q9BVC5 232 aaPredicted RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 MVB12BQ9H7P6 319 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 NFKBIL1Q9UBC1 381 aaPredicted RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 PFDN2Q9UHV9 154 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 MBD1Q9UIS9 605 aaPredicted RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 ELF5Q9UKW6 265 aaPredicted RBP6.33□□□□□ -1.4
LMO3-235ENST00000616247 CACNG2Q9Y698 323 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 CACNA1CQ13936 2221 aa6.33□□□□□ -1.4
LMO3-235ENST00000616247 TCRBV16S1A1N1A0A5B0 115 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 LINC00862A6NCI5 91 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 RTCAO00442 366 aaKnown RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 GABRPO00591 440 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 PGRMC2O15173 223 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 FRS3O43559 492 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 ADAP00813 363 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 IGHA2P01877 340 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 SRPRAP08240 638 aaKnown RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 ACSM4P0C7M7 580 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 ACADMP11310 421 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 RPL17P18621 184 aaKnown RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 ACSL1P33121 698 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 GIPRP48546 466 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 ARF5P84085 180 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 LGALS3BPQ08380 585 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 CNTN1Q12860 1018 aa6.32□□□□□ -1.4
LMO3-235ENST00000616247 ZXDCQ2QGD7 858 aaPredicted RBP6.32□□□□□ -1.4
LMO3-235ENST00000616247 LGALSLQ3ZCW2 172 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms