RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 OLIG2Q13516 323 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 NTRK2Q16620 822 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 BEST3Q8N1M1 668 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 ARL6Q9H0F7 186 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 TP63Q9H3D4 680 aaPredicted RBP16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 SNNO75324 88 aaPredicted RBP16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 HOXD12P35452 270 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 KCNJ5P48544 419 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 TBPL1P62380 186 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 PLCXD2Q0VAA5 305 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 CATSPEREQ5SY80 951 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 C22orf42Q6IC83 251 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 FAM198BQ6UWH4 519 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 RPS27LQ71UM5 84 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 HOXB13Q92826 284 aaPredicted RBP16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 MMABQ96EY8 250 aaPredicted RBP16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 HCRTR2O43614 444 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 FBLP22087 321 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 SLC35G1Q2M3R5 365 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 LRRC37A5PQ49AS3 106 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 TMEM205Q6UW68 189 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 SPATC1Q76KD6 591 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 ALDH16A1Q8IZ83 802 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 SLC22A8Q8TCC7 542 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 MYRFLQ96LU7 910 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 P2RY13Q9BPV8 354 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 GIMAP2Q9UG22 337 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 MYOCOSA0A1B0GUC4 107 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 GPR89AB7ZAQ6 455 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 IL33O95760 270 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 GPR89BP0CG08 455 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 GJA1P17302 382 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 ADH7P40394 386 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 ALDH3B2P48448 385 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 ELAVL3Q14576 367 aaKnown RBP16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 OR4C11Q6IEV9 310 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 BEND4Q6ZU67 534 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 OR4K3Q96R72 315 aa16.63■□□□□ 0.25
HMGXB3-206ENST00000613459 PRKCAP17252 672 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 SERINC5Q86VE9 423 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 GDPD1Q8N9F7 314 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 TOR1AIP2Q8NFQ8 470 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 OR2T4Q8NH00 348 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 SMARCD2Q92925 531 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 FUNDC2Q9BWH2 189 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 PDE7BQ9NP56 450 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 PARPBPQ9NWS1 579 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 PPP4R1LQ9P1A2 415 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 CLEC4EQ9ULY5 219 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 ERVK-19Q9WJR5 959 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 MFSD13AQ14CX5 517 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 ASB15Q8WXK1 588 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 ZNF649Q9BS31 505 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 WDR6Q9NNW5 1121 aaKnown RBP16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 KNDC1Q76NI1 1749 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 COL14A1Q05707 1796 aaKnown RBP16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 MEGF11A6BM72 1044 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 SLC1A7O00341 560 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 SOCS2O14508 198 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 RETP07949 1114 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 ART1P52961 327 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 SLC6A7Q99884 636 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 PPIL3Q9H2H8 161 aaKnown RBP16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 MEN1O00255 615 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 CAPN3P20807 821 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 HMGCLP35914 325 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 PIGFQ07326 219 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 KRTCAP2Q8N6L1 136 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 OR10T2Q8NGX3 314 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 PTCHD1Q96NR3 888 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 TREX2Q9BQ50 279 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 ZNF701M0R085 212 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 CDK2P24941 298 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 ETV3P41162 512 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 VSX2P58304 361 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 TAS2R38P59533 333 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 MLLT1Q03111 559 aaPredicted RBP16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 RIN1Q13671 783 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 DOC2AQ14183 400 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 CDNFQ49AH0 187 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 LAS2Q8IYD9 372 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 SYNPOQ8N3V7 929 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 OR14K1Q8NGZ2 314 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 ARMC1Q9NVT9 282 aa16.62■□□□□ 0.25
HMGXB3-206ENST00000613459 APOC3P02656 99 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 CCL5P13501 91 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 ZNF35P13682 527 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 AMY2BP19961 511 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 MALLQ13021 153 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 CEACAM7Q14002 265 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 GRM2Q14416 872 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 C7orf34Q96L11 122 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 SLC6A16Q9GZN6 736 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 SFXN1Q9H9B4 322 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 FTCDNL1E5RQL4 147 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 DUX1O43812 170 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 SNTB2Q13425 540 aaKnown RBP16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 UAP1L1Q3KQV9 507 aa16.61■□□□□ 0.25
HMGXB3-206ENST00000613459 GSG1LQ6UXU4 331 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms