RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 FAM214AQ32MH5 1076 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 CRB2Q5IJ48 1285 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 TMTC4Q5T4D3 741 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 REEP3Q6NUK4 255 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 PPP4R4Q6NUP7 873 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 TNFAIP8L2Q6P589 184 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-207ENST00000612558 TMEM71Q6P5X7 295 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 TMEM107Q6UX40 140 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 ZBTB49Q6ZSB9 765 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 SZRD1Q7Z422 152 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 OR4N5Q8IXE1 308 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 D2HGDHQ8N465 521 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 METTL25Q8N6Q8 603 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 OR9A2Q8NGT5 310 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 ADAMTS18Q8TE60 1221 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 TBC1D20Q96BZ9 403 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 SLC35G5Q96KT7 338 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 BTBD9Q96Q07 612 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 CIB1Q99828 191 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 C9orf16Q9BUW7 83 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 C8orf4Q9NR00 106 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 TMEM9Q9P0T7 183 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 DNAJB9Q9UBS3 223 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 LRCH1Q9Y2L9 728 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF451Q9Y4E5 1061 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 U3KQA8 63 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 ADAMTS9Q9P2N4 1935 aa8.37□□□□□ -1.07
CCDC47-207ENST00000612558 TMEM247A6NEH6 219 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 C5orf58C9J3I9 102 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 FAM227AF5H4B4 570 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 H0YIG0 161 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 M0QX08 132 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 PLOD2O00469 737 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 HMGN4O00479 90 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 PCDHGA12O60330 932 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 OR2B3O76000 313 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 CST1P01037 141 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 SEMG1P04279 462 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 TFPTP0C1Z6 253 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 RNH1P13489 461 aaKnown RBP8.36□□□□□ -1.07
CCDC47-207ENST00000612558 NELFEP18615 380 aaKnown RBP8.36□□□□□ -1.07
CCDC47-207ENST00000612558 AQP1P29972 269 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 PPP2R1BP30154 601 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 MC3RP41968 323 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 MAGEA2P43356 314 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 HSPA13P48723 471 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 CRYBA2P53672 197 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 PRKAG1P54619 331 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 PCBP3P57721 371 aaKnown RBP8.36□□□□□ -1.07
CCDC47-207ENST00000612558 RPS26P62854 115 aaKnown RBP8.36□□□□□ -1.07
CCDC47-207ENST00000612558 KCNAB1Q14722 419 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 GPR19Q15760 415 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 CYBRD1Q53TN4 286 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 SNAP47Q5SQN1 464 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 GUSBP11Q6P575 273 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 GALNT10Q86SR1 603 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 PATL1Q86TB9 770 aaKnown RBP8.36□□□□□ -1.07
CCDC47-207ENST00000612558 GALNT4Q8N4A0 578 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 EID2Q8N6I1 236 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 PACRGLQ8N7B6 248 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 NUP43Q8NFH3 380 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 MIPOL1Q8TD10 442 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 SLC38A5Q8WUX1 472 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 LZICQ8WZA0 190 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 RAB8BQ92930 207 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 NAT6Q93015 286 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 COL26A1Q96A83 441 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 TPD52L3Q96J77 140 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 LOXL4Q96JB6 756 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 VPS50Q96JG6 964 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 MAGED4Q96JG8 741 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 HSH2DQ96JZ2 352 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF570Q96NI8 536 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 SLC29A1Q99808 456 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 DOHHQ9BU89 302 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 SPRTNQ9H040 489 aaPredicted RBP8.36□□□□□ -1.07
CCDC47-207ENST00000612558 OR51I1Q9H343 314 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 SERHL2Q9H4I8 314 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 ZNF768Q9H5H4 540 aaKnown RBP8.36□□□□□ -1.07
CCDC47-207ENST00000612558 IL1RAPQ9NPH3 570 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 NTMQ9P121 344 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 P2RX2Q9UBL9 471 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 SERTAD3Q9UJW9 196 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 OAZ3Q9UMX2 235 aa8.36□□□□□ -1.07
CCDC47-207ENST00000612558 MRPS33Q9Y291 106 aaKnown RBP8.36□□□□□ -1.07
CCDC47-207ENST00000612558 SAC3D1A6NKF1 404 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 A8MU76 341 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 SHISA8B8ZZ34 492 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 TMEM150CB9EJG8 249 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 H3BMH7 237 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 UPK1AO00322 258 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 GNGT2O14610 69 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 ACOX3O15254 700 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 FGF17O60258 216 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 LDB3O75112 727 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 PDE9AO76083 593 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 SLITRK5O94991 958 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 BMP10O95393 424 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 MED26O95402 600 aa8.35□□□□□ -1.07
CCDC47-207ENST00000612558 CPNE6O95741 557 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms