RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 BORAQ6PGQ7 559 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 MED25Q71SY5 747 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 AMIGO2Q86SJ2 522 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 CHERPQ8IWX8 916 aaKnown RBP8.29□□□□□ -1.08
SMAD4-217ENST00000611848 ST13P4Q8IZP2 240 aaPredicted RBP8.29□□□□□ -1.08
SMAD4-217ENST00000611848 FAM9CQ8IZT9 166 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 ZNF454Q8N9F8 522 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 OR5T3Q8NGG3 340 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 DNAJB8Q8NHS0 232 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 FAM110BQ8TC76 370 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 NUDT8Q8WV74 236 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 APOBEC4Q8WW27 367 aaKnown RBP8.29□□□□□ -1.08
SMAD4-217ENST00000611848 RGMAQ96B86 450 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 TBC1D20Q96BZ9 403 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 WBP1Q96G27 269 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 CENPNQ96H22 339 aaPredicted RBP8.29□□□□□ -1.08
SMAD4-217ENST00000611848 PEX11GQ96HA9 241 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 FCRL1Q96LA6 429 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 CCDC115Q96NT0 180 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 QRFPRQ96P65 431 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 F2RL3Q96RI0 385 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 SERINC2Q96SA4 455 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 SLC29A1Q99808 456 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 OSBPL11Q9BXB4 747 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 OR51B5Q9H339 312 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 ZNF696Q9H7X3 374 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 C8orf4Q9NR00 106 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 MAGEL2Q9UJ55 1249 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 C3orf18Q9UK00 162 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 MAN2B2Q9Y2E5 1009 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 TMED5Q9Y3A6 229 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 PIEZO2Q9H5I5 2752 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 TRBV5-3A0A0A0MS03 114 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 A0A0G2JN53 185 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 POM121CA8CG34 1229 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 C4orf51C9J302 202 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 AKAP10O43572 662 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 SEMA3DO95025 777 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 SCELO95171 688 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 B3GALT4O96024 378 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 PGRP06401 933 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 FHP07954 510 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 SMIM18P0DKX4 95 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 FASP25445 335 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 NEK2P51955 445 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 FOXL2P58012 376 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 OR4D2P58180 307 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 SELPLGQ14242 412 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 CYP51A1Q16850 503 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 FAM174BQ3ZCQ3 159 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 RNF220Q5VTB9 566 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 ZBTB49Q6ZSB9 765 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 SHISA6Q6ZSJ9 500 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 PPP1R32Q7Z5V6 425 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 MRGPREQ86SM8 312 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 LAPTM4BQ86VI4 370 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 PRSS58Q8IYP2 241 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 CA13Q8N1Q1 262 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 RNF175Q8N4F7 328 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 KRTCAP2Q8N6L1 136 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 LSM14AQ8ND56 463 aaKnown RBP8.29□□□□□ -1.08
SMAD4-217ENST00000611848 PLPP5Q8NEB5 264 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 ADAMTS18Q8TE60 1221 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 SELENOMQ8WWX9 145 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 TTC9Q92623 222 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 EXTL1Q92935 676 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 MTFMTQ96DP5 389 aaKnown RBP8.29□□□□□ -1.08
SMAD4-217ENST00000611848 FER1L6-AS2Q96M78 137 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 ZNF583Q96ND8 569 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 UBL7Q96S82 380 aaPredicted RBP8.29□□□□□ -1.08
SMAD4-217ENST00000611848 ARHGAP9Q9BRR9 750 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 RPF2Q9H7B2 306 aaKnown RBP8.29□□□□□ -1.08
SMAD4-217ENST00000611848 BRF2Q9HAW0 419 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 PRDM7Q9NQW5 492 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 AHSPQ9NZD4 102 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 VAPAQ9P0L0 249 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 ANAPC2Q9UJX6 822 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 MKL2Q9ULH7 1088 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 AURKCQ9UQB9 309 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 DLGAP4Q9Y2H0 992 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 AP3M1Q9Y2T2 418 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 KCNMB2Q9Y691 235 aa8.29□□□□□ -1.08
SMAD4-217ENST00000611848 COL6A6A6NMZ7 2263 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 ITPR1Q14643 2758 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 ATRXP46100 2492 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 TLN1Q9Y490 2541 aaKnown RBP8.28□□□□□ -1.08
SMAD4-217ENST00000611848 CHD6Q8TD26 2715 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 PLPP1O14494 284 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 SOCS6O14544 535 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 ACOX3O15254 700 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 ALOX12BO75342 701 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 SH3BGRLO75368 114 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 TNFAIP8O95379 198 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 HSD3B1P14060 373 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 NCK1P16333 377 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 HOXB9P17482 250 aaPredicted RBP8.28□□□□□ -1.08
SMAD4-217ENST00000611848 GGT1P19440 569 aa8.28□□□□□ -1.08
SMAD4-217ENST00000611848 HIST1H1TP22492 207 aaPredicted RBP8.28□□□□□ -1.08
SMAD4-217ENST00000611848 ATP5A1P25705 553 aaKnown RBP8.28□□□□□ -1.08
SMAD4-217ENST00000611848 HSD3B2P26439 372 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms