RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 FAM222BQ8WU58 562 aa22.33■■□□□ 1.17
CDKN3-211ENST00000611205 MRRFQ96E11 262 aaKnown RBP22.33■■□□□ 1.17
CDKN3-211ENST00000611205 IPPKQ9H8X2 491 aa22.33■■□□□ 1.17
CDKN3-211ENST00000611205 CXorf21Q9HAI6 301 aa22.33■■□□□ 1.17
CDKN3-211ENST00000611205 TEX10Q9NXF1 929 aaPredicted RBP22.33■■□□□ 1.17
CDKN3-211ENST00000611205 CBLCQ9ULV8 474 aa22.33■■□□□ 1.17
CDKN3-211ENST00000611205 RNF11Q9Y3C5 154 aa22.33■■□□□ 1.17
CDKN3-211ENST00000611205 UGDHO60701 494 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 SNX4O95219 450 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 C2P06681 752 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 CT62P0C5K7 136 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 CDK9P50750 372 aaKnown RBP22.32■■□□□ 1.16
CDKN3-211ENST00000611205 ZNF136P52737 540 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 DGKQP52824 942 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 ALDH18A1P54886 795 aaKnown RBP22.32■■□□□ 1.16
CDKN3-211ENST00000611205 NRG3P56975 720 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 NAB1Q13506 487 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 SPATA4Q8NEY3 305 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 WDR20Q8TBZ3 569 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 GNRHR2Q96P88 292 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 ANGPTL4Q9BY76 406 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 OR10A5Q9H207 317 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 EPB41L4BQ9H329 900 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 GRPEL1Q9HAV7 217 aa22.32■■□□□ 1.16
CDKN3-211ENST00000611205 CPSF2Q9P2I0 782 aaKnown RBP22.32■■□□□ 1.16
CDKN3-211ENST00000611205 ZNF629Q9UEG4 869 aaPredicted RBP22.32■■□□□ 1.16
CDKN3-211ENST00000611205 FOXD3Q9UJU5 478 aaPredicted RBP22.32■■□□□ 1.16
CDKN3-211ENST00000611205 HPNP05981 417 aa22.31■■□□□ 1.16
CDKN3-211ENST00000611205 AGFG1P52594 562 aaKnown RBP22.31■■□□□ 1.16
CDKN3-211ENST00000611205 PCBP2Q15366 365 aaKnown RBP eCLIP22.31■■□□□ 1.16
CDKN3-211ENST00000611205 SF3B4Q15427 424 aaKnown RBP eCLIP22.31■■□□□ 1.16
CDKN3-211ENST00000611205 FBXL19-AS1Q494R0 122 aa22.31■■□□□ 1.16
CDKN3-211ENST00000611205 C6orf163Q5TEZ5 329 aa22.31■■□□□ 1.16
CDKN3-211ENST00000611205 MROH9Q5TGP6 573 aa22.31■■□□□ 1.16
CDKN3-211ENST00000611205 FBXO25Q8TCJ0 367 aa22.31■■□□□ 1.16
CDKN3-211ENST00000611205 TRIB1Q96RU8 372 aa22.31■■□□□ 1.16
CDKN3-211ENST00000611205 PRDM14Q9GZV8 571 aa22.31■■□□□ 1.16
CDKN3-211ENST00000611205 UBQLN3Q9H347 655 aa22.31■■□□□ 1.16
CDKN3-211ENST00000611205 C15orf41Q9Y2V0 281 aa22.31■■□□□ 1.16
CDKN3-211ENST00000611205 UTP11Q9Y3A2 253 aaKnown RBP22.31■■□□□ 1.16
CDKN3-211ENST00000611205 ZNF469Q96JG9 3925 aaPredicted RBP22.3■■□□□ 1.16
CDKN3-211ENST00000611205 GNB5O14775 395 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 SIX3O95343 332 aaPredicted RBP22.3■■□□□ 1.16
CDKN3-211ENST00000611205 KRT15P19012 456 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 NT5EP21589 574 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 CASP3P42574 277 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 RPP38P78345 283 aaKnown RBP22.3■■□□□ 1.16
CDKN3-211ENST00000611205 CAV1Q03135 178 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 FOXD4Q12950 439 aaPredicted RBP22.3■■□□□ 1.16
CDKN3-211ENST00000611205 ACAP2Q15057 778 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 EIPR1Q53HC9 387 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 WIPI1Q5MNZ9 446 aaPredicted RBP22.3■■□□□ 1.16
CDKN3-211ENST00000611205 FNDC7Q5VTL7 733 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 NSUN5P2Q63ZY6 315 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 VASNQ6EMK4 673 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 POMZP3Q6PJE2 187 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 L3MBTL4Q8NA19 623 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 OR4K14Q8NGD5 310 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 ATP6V1E2Q96A05 226 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 CDK15Q96Q40 435 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 SECISBP2Q96T21 854 aaKnown RBP22.3■■□□□ 1.16
CDKN3-211ENST00000611205 SERPINI1Q99574 410 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 PSD3Q9NYI0 1048 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 IKBKGQ9Y6K9 419 aa22.3■■□□□ 1.16
CDKN3-211ENST00000611205 MED12Q93074 2177 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 TUBAL3A6NHL2 446 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 FOXE1O00358 373 aaPredicted RBP22.29■■□□□ 1.16
CDKN3-211ENST00000611205 CLDN9O95484 217 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 BMP7P18075 431 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 FUT7Q11130 342 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 UAP1Q16222 522 aaPredicted RBP22.29■■□□□ 1.16
CDKN3-211ENST00000611205 KLC3Q6P597 504 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 CCDC91Q7Z6B0 441 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 ZNF615Q8N8J6 731 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 ADIPOR1Q96A54 375 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 ALPK1Q96QP1 1244 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 UGT2B28Q9BY64 529 aa22.29■■□□□ 1.16
CDKN3-211ENST00000611205 NOL11Q9H8H0 719 aaKnown RBP22.29■■□□□ 1.16
CDKN3-211ENST00000611205 TNPO3Q9Y5L0 923 aaKnown RBP22.29■■□□□ 1.16
CDKN3-211ENST00000611205 ACANP16112 2415 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 HRNRQ86YZ3 2850 aaPredicted RBP22.28■■□□□ 1.16
CDKN3-211ENST00000611205 A0A096LPK6 155 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 EEF1E1-BLOC1S5C9J1V9 151 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 EEF1E1O43324 174 aaKnown RBP22.28■■□□□ 1.16
CDKN3-211ENST00000611205 KLHL2O95198 593 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 XKP51811 444 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 TRADDQ15628 312 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 NNATQ16517 81 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 DCST1Q5T197 706 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 PAMR1Q6UXH9 720 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 KIF18BQ86Y91 864 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 ABTB1Q969K4 478 aaPredicted RBP22.28■■□□□ 1.16
CDKN3-211ENST00000611205 TMEM41AQ96HV5 264 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 RAB17Q9H0T7 212 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 METTL7AQ9H8H3 244 aa22.28■■□□□ 1.16
CDKN3-211ENST00000611205 NAV3Q8IVL0 2385 aa22.27■■□□□ 1.16
CDKN3-211ENST00000611205 CCDC189A1A4V9 331 aa22.27■■□□□ 1.16
CDKN3-211ENST00000611205 SEMA3DO95025 777 aa22.27■■□□□ 1.16
CDKN3-211ENST00000611205 KLK1P06870 262 aa22.27■■□□□ 1.16
CDKN3-211ENST00000611205 HOXB4P17483 251 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms