RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 MANEALQ5VSG8 457 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 CRTC1Q6UUV9 634 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 CREB3L2Q70SY1 520 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 SUN3Q8TAQ9 357 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 GAL3ST1Q99999 423 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 NIPSNAP1Q9BPW8 284 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 ASIC5Q9NY37 505 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 ZNF639Q9UID6 485 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 NUBP2Q9Y5Y2 271 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 A0A1W2PPK0 400 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 GLOD5A6NK44 160 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 B8ZZF3 427 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 EPHX1P07099 455 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 TACSTD2P09758 323 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 SLC35G6P0C7Q6 338 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 C8orf89P0DMQ9 161 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 EVI2BP34910 448 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 STK19P49842 368 aaPredicted RBP13.93□□□□□ -0.18
VPS36-207ENST00000611132 SEC23BQ15437 767 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 FAM219BQ5XKK7 198 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 PDZD3Q86UT5 571 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 ZNF676Q8N7Q3 588 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 DNAJC5GQ8N7S2 189 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 NUS1Q96E22 293 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 MCCC1Q96RQ3 725 aaPredicted RBP13.93□□□□□ -0.18
VPS36-207ENST00000611132 RHNO1Q9BSD3 238 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 CDADC1Q9BWV3 514 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 MRPS30Q9NP92 439 aaKnown RBP13.93□□□□□ -0.18
VPS36-207ENST00000611132 SLC35C2Q9NQQ7 365 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 KLHL42Q9P2K6 505 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 WDR45Q9Y484 360 aa13.93□□□□□ -0.18
VPS36-207ENST00000611132 WWP2O00308 870 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 CREBL2O60519 120 aaPredicted RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 MMP2P08253 660 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 EPCAMP16422 314 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 ETV3P41162 512 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 ELOAQ14241 798 aaKnown RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 SFRP4Q6FHJ7 346 aaPredicted RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 FAM198BQ6UWH4 519 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 NLGN4XQ8N0W4 816 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 GLYATL1Q969I3 302 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS36-207ENST00000611132 THSD1Q9NS62 852 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 TXNL4BQ9NX01 149 aaKnown RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 RTCAO00442 366 aaKnown RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 GASTP01350 101 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 ALPPL2P10696 532 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 NDUFV2P19404 249 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 CCR7P32248 378 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 SPINT3P49223 89 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 GGTA1PQ4G0N0 100 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 VASH1Q7L8A9 365 aaPredicted RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 INO80EQ8NBZ0 244 aaPredicted RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 OR52E4Q8NGH9 312 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 ZNF461Q8TAF7 563 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 SH3RF2Q8TEC5 729 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 SLCO3A1Q9UIG8 710 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 GNG8Q9UK08 70 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 ASB1Q9Y576 335 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 M0R3H8 397 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 PCCBP05166 539 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 DDX6P26196 483 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS36-207ENST00000611132 FNTBP49356 437 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 HBA1P69905 142 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 CAP1Q01518 475 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 SWI5Q1ZZU3 235 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 DCUN1D3Q8IWE4 304 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 TTTY10Q9BZA0 68 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 EXO5Q9H790 373 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 ELOVL2Q9NXB9 296 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 NDUFAF4Q9P032 175 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 PLCL2Q9UPR0 1127 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 CFAP20Q9Y6A4 193 aaKnown RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 TEX51A0A1B0GUA7 166 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 ARSBP15848 533 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 AOAHP28039 575 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 RBM34P42696 430 aaKnown RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 CAV3P56539 151 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 LMAN2Q12907 356 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 CCDC58Q4VC31 144 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 PYCR3Q53H96 274 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 PRAMEF17Q5VTA0 474 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 FAM180BQ6P0A1 224 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 MS4A15Q8N5U1 240 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 GPR26Q8NDV2 337 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 TRMT10AQ8TBZ6 339 aaKnown RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 FANK1Q8TC84 345 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 UBTD2Q8WUN7 234 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 ASB12Q8WXK4 309 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 NEDD4LQ96PU5 975 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 F2RL3Q96RI0 385 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 C17orf62Q9BQA9 187 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 RBCK1Q9BYM8 510 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 MKKSQ9NPJ1 570 aaPredicted RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 TAS2R3Q9NYW6 316 aa13.92□□□□□ -0.18
VPS36-207ENST00000611132 MRPS23Q9Y3D9 190 aaKnown RBP13.92□□□□□ -0.18
VPS36-207ENST00000611132 ASPDHA6ND91 283 aa13.91□□□□□ -0.18
VPS36-207ENST00000611132 LRRC72A6NJI9 287 aa13.91□□□□□ -0.18
VPS36-207ENST00000611132 POLR1CO15160 346 aaPredicted RBP13.91□□□□□ -0.18
VPS36-207ENST00000611132 CD2P06729 351 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms