RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SULT1A4P0DMN0 295 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 HOXA5P20719 270 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 HSD11B1P28845 292 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 SFNP31947 248 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 PTPN7P35236 360 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 MMP12P39900 470 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 RAG2P55895 527 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 NFKB2Q00653 900 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 YWHAHQ04917 246 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 SREBF2Q12772 1141 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 KEAP1Q14145 624 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 UBXN2BQ14CS0 331 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 MED22Q15528 200 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 FAM189A2Q15884 450 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 TMEM88Q6PEY1 159 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 WASH2PQ6VEQ5 465 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 GCNT7Q6ZNI0 430 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 GDPGP1Q6ZNW5 385 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 FGD2Q7Z6J4 655 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 LRRC28Q86X40 367 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 KATNAL2Q8IYT4 538 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 OR2V1Q8NHB1 315 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 MAPK15Q8TD08 544 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 FAF2Q96CS3 445 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 DNAJC19Q96DA6 116 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 RNF157Q96PX1 679 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 RAD9AQ99638 391 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 DLL4Q9NR61 685 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 GTSE1Q9NYZ3 720 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 ZIM2Q9NZV7 527 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 AJAP1Q9UKB5 411 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 FBXO7Q9Y3I1 522 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 RAP2CQ9Y3L5 183 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 PLIN4Q96Q06 1357 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 LOC100130705A0A1B0GUX0 176 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 C5orf58C9J3I9 102 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 M0R082 166 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 UPK1AO00322 258 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 SCAMP2O15127 329 aaKnown RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 STBD1O95210 358 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 PRAMEF1O95521 474 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 CST3P01034 146 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 HOXD8P13378 290 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 INSRRP14616 1297 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 TYRP14679 529 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 HLA-DPA1P20036 260 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 GABRR1P24046 479 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 SSTR2P30874 369 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 CD200P41217 278 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 CAPZBP47756 277 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 CDX1P47902 265 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 CDC34P49427 236 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 CLCN3P51790 818 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 CRYBB1P53674 252 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 TLE4Q04727 773 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 ZP2Q05996 745 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 CHIT1Q13231 466 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 LRRC32Q14392 662 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF284Q2VY69 593 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 MSS51Q4VC12 460 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 PSRC1Q6PGN9 363 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 TBPL2Q6SJ96 375 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 SLC29A4Q7RTT9 530 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 ZNF551Q7Z340 670 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 B3GNT8Q7Z7M8 397 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 SLC47A2Q86VL8 602 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 SERPINA12Q8IW75 414 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 HSD17B11Q8NBQ5 300 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 PXT1Q8NFP0 134 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 ADAMTS18Q8TE60 1221 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 PKMYT1Q99640 499 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 MRPL4Q9BYD3 311 aaKnown RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 AMBRA1Q9C0C7 1298 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 OR52A5Q9H2C5 316 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 PTGES2Q9H7Z7 377 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 JPH1Q9HDC5 661 aaPredicted RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 MIEF1Q9NQG6 463 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 TAS2R14Q9NYV8 317 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 PCDHB14Q9Y5E9 798 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.43□□□□□ -1.06
COMMD3-215ENST00000602574 NHSQ6T4R5 1651 aa8.43□□□□□ -1.06
COMMD3-215ENST00000602574 PRAMEF33A0A0G2JMD5 474 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 LCHNA4D1U4 455 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 ANXA2P2A6NMY6 339 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 MYO1GB0I1T2 1018 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 H7C417 338 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 PRAMEF10O60809 474 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 FADS2O95864 444 aaKnown RBP8.42□□□□□ -1.06
COMMD3-215ENST00000602574 PIGRP01833 764 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 TMIGD3P0DMS9 266 aaPredicted RBP8.42□□□□□ -1.06
COMMD3-215ENST00000602574 HOXB6P17509 224 aaKnown RBP8.42□□□□□ -1.06
COMMD3-215ENST00000602574 NDUFV2P19404 249 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 YWHAQP27348 245 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 MNDAP41218 407 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 SLC11A1P49279 550 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 ATP4BP51164 291 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 CLCN7P51798 805 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 TDGF1P3P51864 188 aa8.42□□□□□ -1.06
COMMD3-215ENST00000602574 LSM6P62312 80 aaKnown RBP8.42□□□□□ -1.06
COMMD3-215ENST00000602574 VLDLRP98155 873 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms