RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	DGAT2L6	Q6ZPD8	337 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	IFNE	Q86WN2	208 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	PRR22	Q8IZ63	422 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	SNX31	Q8N9S9	440 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	MCU	Q8NE86	351 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	FAM45A	Q8TCE6	357 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	GTPBP3	Q969Y2	492 aa	Known RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	TP53INP1	Q96A56	240 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	DTNBP1	Q96EV8	351 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	PDLIM5	Q96HC4	596 aa	Known RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	EFCAB11	Q9BUY7	163 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	KLHL4	Q9C0H6	718 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	OPN3	Q9H1Y3	402 aa	Predicted RBP	11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	ACTR8	Q9H981	624 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	SERHL	Q9NQF3	203 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	PSD3	Q9NYI0	1048 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	GPRC5B	Q9NZH0	403 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	KLRF1	Q9NZS2	232 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	CLCF1	Q9UBD9	225 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	LAMP3	Q9UQV4	416 aa		11.14	□□□□□ -0.63
NUP62-223	ENST00000601665	PLOD2	O00469	737 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	SOX30	O94993	753 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	KRT14	P02533	472 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	BUD31	P41223	144 aa	Predicted RBP	11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	CDKL1	Q00532	357 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	SLAMF1	Q13291	335 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	LAPTM5	Q13571	262 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	CAPRIN1	Q14444	709 aa	Known RBP	11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	SPRED3	Q2MJR0	410 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	C18orf21	Q32NC0	220 aa	Predicted RBP	11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	TMEM35A	Q53FP2	167 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	C6orf163	Q5TEZ5	329 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	ANKRD34A	Q69YU3	496 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	VWA1	Q6PCB0	445 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	ADGRE4P	Q86SQ3	457 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	ADAMTSL2	Q86TH1	951 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	MED12L	Q86YW9	2145 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	NKAP	Q8N5F7	415 aa	Known RBP	11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	RNF10	Q8N5U6	811 aa	Known RBP	11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	CAVIN3	Q969G5	261 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	STARD4	Q96DR4	205 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	PTCD3	Q96EY7	689 aa	Known RBP	11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	ZNF845	Q96IR2	970 aa	Predicted RBP	11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	SFXN2	Q96NB2	322 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	CENPK	Q9BS16	269 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	DESI2	Q9BSY9	194 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	EHD1	Q9H4M9	534 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	CNOT10	Q9H9A5	744 aa	Known RBP	11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	DNAJC11	Q9NVH1	559 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	TAS2R10	Q9NYW0	307 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	WWOX	Q9NZC7	414 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	CTNNAL1	Q9UBT7	734 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	PHF11	Q9UIL8	331 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	PTBP2	Q9UKA9	531 aa	Known RBP	11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	CDC42EP3	Q9UKI2	254 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	IKZF3	Q9UKT9	509 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	DLGAP4	Q9Y2H0	992 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	OARD1	Q9Y530	152 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	HEATR5A	Q86XA9	2040 aa		11.13	□□□□□ -0.63
NUP62-223	ENST00000601665	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	SLC22A20	A6NK97	555 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	SAP18	O00422	153 aa	Known RBP	11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	HS3ST1	O14792	307 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	ABCB7	O75027	752 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	CBR3	O75828	277 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	TTC4	O95801	387 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	TGM6	O95932	706 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	PCNA	P12004	261 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	CCKAR	P32238	428 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	SLC6A12	P48065	614 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	STAR	P49675	285 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	RAP1GDS1	P52306	607 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	TNFRSF17	Q02223	184 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	DOC2A	Q14183	400 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	EXOC3L2	Q2M3D2	409 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	KRTAP24-1	Q3LI83	254 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	SLC30A6	Q6NXT4	461 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	UBE3D	Q7Z6J8	389 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	GPR180	Q86V85	440 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	ZNF611	Q8N823	705 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	UBE2E3	Q969T4	207 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	REPS1	Q96D71	796 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	SIGLEC10	Q96LC7	697 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	C19orf24	Q9BVV8	132 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	OSBPL11	Q9BXB4	747 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	BEX2	Q9BXY8	128 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	MS4A8	Q9BY19	250 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	TSPY26P	Q9H489	355 aa		11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	CORO1C	Q9ULV4	474 aa	Predicted RBP	11.12	□□□□□ -0.63
NUP62-223	ENST00000601665	C2orf72	A6NCS6	295 aa		11.11	□□□□□ -0.63
NUP62-223	ENST00000601665	SCEL	O95171	688 aa		11.11	□□□□□ -0.63
NUP62-223	ENST00000601665	GPR75	O95800	540 aa		11.11	□□□□□ -0.63
NUP62-223	ENST00000601665	TGFB1	P01137	390 aa		11.11	□□□□□ -0.63
NUP62-223	ENST00000601665	RHOXF2B	P0C7M4	288 aa		11.11	□□□□□ -0.63
NUP62-223	ENST00000601665	ZNF37A	P17032	561 aa	Predicted RBP	11.11	□□□□□ -0.63
NUP62-223	ENST00000601665	TBXA2R	P21731	343 aa		11.11	□□□□□ -0.63
NUP62-223	ENST00000601665	SSTR4	P31391	388 aa		11.11	□□□□□ -0.63
NUP62-223	ENST00000601665	IRF8	Q02556	426 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms