RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 HYAL4Q2M3T9 481 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 SPRED3Q2MJR0 410 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 ZNF791Q3KP31 576 aaPredicted RBP17.27■□□□□ 0.36
PNKP-213ENST00000599543 SGO1Q5FBB7 561 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 L3MBTL4Q8NA19 623 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 FAM13CQ8NE31 585 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 OR4F6Q8NGB9 312 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 WDR20Q8TBZ3 569 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 DOK4Q8TEW6 326 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 RIT1Q92963 219 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 TREX2Q9BQ50 279 aaPredicted RBP17.27■□□□□ 0.36
PNKP-213ENST00000599543 WWTR1Q9GZV5 400 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 EXO5Q9H790 373 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 DDX31Q9H8H2 851 aaKnown RBP17.27■□□□□ 0.36
PNKP-213ENST00000599543 KCNJ16Q9NPI9 418 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 ACAD8Q9UKU7 415 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 BOKQ9UMX3 212 aaPredicted RBP17.27■□□□□ 0.36
PNKP-213ENST00000599543 ASB4Q9Y574 426 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.27■□□□□ 0.36
PNKP-213ENST00000599543 ARHGAP21Q5T5U3 1957 aa17.27■□□□□ 0.36
PNKP-213ENST00000599543 A0A1B0GVC2 190 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 A0A1W2PR48 441 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 FOXE1O00358 373 aaPredicted RBP17.26■□□□□ 0.35
PNKP-213ENST00000599543 SUSD5O60279 629 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 NADKO95544 446 aaPredicted RBP17.26■□□□□ 0.35
PNKP-213ENST00000599543 AIFM1O95831 613 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 CELA3AP09093 270 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 CAPN3P20807 821 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 SERPINB3P29508 390 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 PRKAA2P54646 552 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 PRAMEF20Q5VT98 475 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 MRM1Q6IN84 353 aaKnown RBP17.26■□□□□ 0.35
PNKP-213ENST00000599543 B3GNT6Q6ZMB0 384 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 CCDC71Q8IV32 467 aaPredicted RBP17.26■□□□□ 0.35
PNKP-213ENST00000599543 OR10Q1Q8NGQ4 319 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 PAQR8Q8TEZ7 354 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 FAM111AQ96PZ2 611 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 UCK2Q9BZX2 261 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 MCCC2Q9HCC0 563 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 SH2D2AQ9NP31 389 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 PSD3Q9NYI0 1048 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 TNFRSF10DQ9UBN6 386 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 ITGB1BP2Q9UKP3 347 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 SPG11Q96JI7 2443 aa17.26■□□□□ 0.35
PNKP-213ENST00000599543 OR6C76A6NM76 312 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 OR4F21O95013 312 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 CPA3P15088 417 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 IMPDH1P20839 514 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 MSX1P28360 303 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 SLC37A1P57057 533 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 KRTAP10-9P60411 292 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 CLCQ05315 142 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 TFF3Q07654 80 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 EBPQ15125 230 aaKnown RBP17.25■□□□□ 0.35
PNKP-213ENST00000599543 CCDC153Q494R4 210 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 TCHHL1Q5QJ38 904 aaPredicted RBP17.25■□□□□ 0.35
PNKP-213ENST00000599543 OR52E8Q6IFG1 317 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 LETMD1Q6P1Q0 360 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 MILR1Q7Z6M3 343 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 FBXW8Q8N3Y1 598 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 SARAFQ96BY9 339 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 SERPINI1Q99574 410 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 MECRQ9BV79 373 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 SHCBP1LQ9BZQ2 653 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 IQCGQ9H095 443 aaKnown RBP17.25■□□□□ 0.35
PNKP-213ENST00000599543 ZNF703Q9H7S9 590 aaPredicted RBP17.25■□□□□ 0.35
PNKP-213ENST00000599543 NPDC1Q9NQX5 325 aaPredicted RBP17.25■□□□□ 0.35
PNKP-213ENST00000599543 RYDENQ9NUL5 291 aaKnown RBP17.25■□□□□ 0.35
PNKP-213ENST00000599543 CNIH4Q9P003 139 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 ZNF225Q9UK10 706 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 PLLPQ9Y342 182 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 EXPH5Q8NEV8 1989 aa17.25■□□□□ 0.35
PNKP-213ENST00000599543 TRGV5A0A0B4J1U4 118 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 WASHC1A8K0Z3 465 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 HCN1O60741 890 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 WDR1O75083 606 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 TOXO94900 526 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 SEMA3DO95025 777 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 GBAP04062 536 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 FBXO45P0C2W1 286 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 SLC35E2P0CK97 266 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 IGFBP2P18065 325 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 POU3F2P20265 443 aaPredicted RBP17.24■□□□□ 0.35
PNKP-213ENST00000599543 GALNSP34059 522 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 NAGLUP54802 743 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 PCLAFQ15004 111 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 WLSQ5T9L3 541 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 TTC19Q6DKK2 380 aaPredicted RBP17.24■□□□□ 0.35
PNKP-213ENST00000599543 LYPD8Q6UX82 237 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 SLC22A9Q8IVM8 553 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 C10orf107Q8IVU9 208 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 TAGAPQ8N103 731 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 OR10G3Q8NGC4 313 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 TCP10LQ8TDR4 215 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 JSRP1Q96MG2 331 aaPredicted RBP17.24■□□□□ 0.35
PNKP-213ENST00000599543 TTYH2Q9BSA4 534 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 C1QTNF3Q9BXJ4 246 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 GSTO2Q9H4Y5 243 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 ZFP64Q9NPA5 681 aa17.24■□□□□ 0.35
PNKP-213ENST00000599543 FARSBQ9NSD9 589 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms