RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 CNOT11Q9UKZ1 510 aaKnown RBP21.6■■□□□ 1.05
LSM4-204ENST00000594828 NPFFR2Q9Y5X5 522 aa21.6■■□□□ 1.05
LSM4-204ENST00000594828 ENO4A6NNW6 628 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 AQP7O14520 342 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 TP53I11O14683 189 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 ULK1O75385 1050 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 ERAL1O75616 437 aaKnown RBP21.59■■□□□ 1.05
LSM4-204ENST00000594828 GSTA1P08263 222 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 RFPL3SP0C7P2 107 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 CSNK2A2P19784 350 aaPredicted RBP21.59■■□□□ 1.05
LSM4-204ENST00000594828 FEN1P39748 380 aaKnown RBP21.59■■□□□ 1.05
LSM4-204ENST00000594828 PRKAA2P54646 552 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 NRG3P56975 720 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 TRA2BP62995 288 aaKnown RBP21.59■■□□□ 1.05
LSM4-204ENST00000594828 PMPCAQ10713 525 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 CSTF3Q12996 717 aaKnown RBP21.59■■□□□ 1.05
LSM4-204ENST00000594828 ZNF585AQ6P3V2 769 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 ACAD11Q709F0 780 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 MMP21Q8N119 569 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 CHTF18Q8WVB6 975 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 DIO2Q92813 273 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 ADIPOR1Q96A54 375 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 SARAFQ96BY9 339 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 JSRP1Q96MG2 331 aaPredicted RBP21.59■■□□□ 1.05
LSM4-204ENST00000594828 FAIM2Q9BWQ8 316 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 BRINP2Q9C0B6 783 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 EPB41L4BQ9H329 900 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 TNFRSF10DQ9UBN6 386 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 DCDC2Q9UHG0 476 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 ACAD8Q9UKU7 415 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 RNF6Q9Y252 685 aa21.59■■□□□ 1.05
LSM4-204ENST00000594828 ZNF407Q9C0G0 2248 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 TRGV5A0A0B4J1U4 118 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 FIGNL2A6NMB9 653 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 HCN1O60741 890 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 LRATO95237 230 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 S1PR1P21453 382 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 ACVR2AP27037 513 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 HMOX2P30519 316 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 CHRNB4P30926 498 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 MAP4K2Q12851 820 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 RPS6KA2Q15349 733 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 TBCELQ5QJ74 424 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 VWA5B2Q8N398 1253 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 L3HYPDHQ96EM0 354 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 DOHHQ9BU89 302 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 ZNF703Q9H7S9 590 aaPredicted RBP21.58■■□□□ 1.05
LSM4-204ENST00000594828 STK38LQ9Y2H1 464 aa21.58■■□□□ 1.05
LSM4-204ENST00000594828 ANKRD33BA6NCL7 494 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 ATP1B1P05026 303 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 ALDH9A1P49189 494 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 TMED10P49755 219 aaKnown RBP21.57■■□□□ 1.04
LSM4-204ENST00000594828 NUP107P57740 925 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 FBXW4P57775 412 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 PRICKLE4Q2TBC4 344 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 TMEM198Q66K66 360 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 FAM111BQ6SJ93 734 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 GSPT2Q8IYD1 628 aaKnown RBP21.57■■□□□ 1.04
LSM4-204ENST00000594828 LRRC25Q8N386 305 aaPredicted RBP21.57■■□□□ 1.04
LSM4-204ENST00000594828 GBP7Q8N8V2 638 aaPredicted RBP21.57■■□□□ 1.04
LSM4-204ENST00000594828 C17orf47Q8NEP4 570 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 LILRB4Q8NHJ6 448 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 MZB1Q8WU39 189 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 KLHL29Q96CT2 875 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 SPOCK3Q9BQ16 436 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 TRIM8Q9BZR9 551 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 QPCTLQ9NXS2 382 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 BCAP29Q9UHQ4 241 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 MCM8Q9UJA3 840 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 ZNF780BQ9Y6R6 833 aa21.57■■□□□ 1.04
LSM4-204ENST00000594828 LRRC3CA6NJW4 275 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 ESRRBO95718 433 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 CHN1P15882 459 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 PKNOX1P55347 436 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 MGAT2Q10469 447 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 LCP2Q13094 533 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 WLSQ5T9L3 541 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 CCDC71Q8IV32 467 aaPredicted RBP21.56■■□□□ 1.04
LSM4-204ENST00000594828 ZNF295-AS1Q8N0V1 137 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 SPPL2AQ8TCT8 520 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 SECISBP2Q96T21 854 aaKnown RBP21.56■■□□□ 1.04
LSM4-204ENST00000594828 ENKD1Q9H0I2 346 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 ACKR4Q9NPB9 350 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 MAT2BQ9NZL9 334 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 B4GALT7Q9UBV7 327 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 CFL2Q9Y281 166 aa21.56■■□□□ 1.04
LSM4-204ENST00000594828 A0A1W2PPM1 405 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 CCDC151A5D8V7 595 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 TRIM3O75382 744 aaPredicted RBP21.55■■□□□ 1.04
LSM4-204ENST00000594828 ENO1P06733 434 aaKnown RBP21.55■■□□□ 1.04
LSM4-204ENST00000594828 GPX3P22352 226 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 RPP38P78345 283 aaKnown RBP21.55■■□□□ 1.04
LSM4-204ENST00000594828 FAM180BQ6P0A1 224 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 B3GNT6Q6ZMB0 384 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 PRR22Q8IZ63 422 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 EIF1ADQ8N9N8 165 aaKnown RBP21.55■■□□□ 1.04
LSM4-204ENST00000594828 LRRN4CLQ8ND94 238 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 ADCY4Q8NFM4 1077 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 OR10Q1Q8NGQ4 319 aa21.55■■□□□ 1.04
LSM4-204ENST00000594828 CCDC126Q96EE4 140 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms