RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PTGER1P34995 402 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 FEN1P39748 380 aaKnown RBP18.55■□□□□ 0.56
CLIP3-206ENST00000593074 BTN3A2P78410 334 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 LASP1Q14847 261 aaKnown RBP18.55■□□□□ 0.56
CLIP3-206ENST00000593074 PTGES3Q15185 160 aaKnown RBP18.55■□□□□ 0.56
CLIP3-206ENST00000593074 COL13A1Q5TAT6 717 aaPredicted RBP18.55■□□□□ 0.56
CLIP3-206ENST00000593074 TMEM107Q6UX40 140 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 CCDC81Q6ZN84 652 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 TM4SF19Q96DZ7 209 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 WFDC6Q9BQY6 131 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 FUZQ9BT04 418 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 COPS4Q9BT78 406 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 PLGRKTQ9HBL7 147 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 GIMAP4Q9NUV9 329 aa18.55■□□□□ 0.56
CLIP3-206ENST00000593074 ZAR1LA6NP61 321 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 FAAHO00519 579 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 H1F0P07305 194 aaKnown RBP18.54■□□□□ 0.56
CLIP3-206ENST00000593074 CHRM4P08173 479 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 SLC35G6P0C7Q6 338 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 ZNF888P0CJ79 500 aaPredicted RBP18.54■□□□□ 0.56
CLIP3-206ENST00000593074 C8orf89P0DMQ9 161 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 NR2F6P10588 404 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 UGT2B7P16662 529 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 MPIP34949 423 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 PRKAG1P54619 331 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 PRR5P85299 388 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 GNA13Q14344 377 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 SEC23BQ15437 767 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 UBE2UQ5VVX9 321 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 PRAMEF8Q5VWM4 474 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 PRAMEF7Q5VXH5 474 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 DEF8Q6ZN54 512 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 FAM92BQ6ZTR7 304 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 TRIM73Q86UV7 250 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 COMTD1Q86VU5 262 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 RBM45Q8IUH3 476 aaKnown RBP18.54■□□□□ 0.56
CLIP3-206ENST00000593074 LACC1Q8IV20 430 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 VANGL1Q8TAA9 524 aaPredicted RBP18.54■□□□□ 0.56
CLIP3-206ENST00000593074 UTP15Q8TED0 518 aaKnown RBP18.54■□□□□ 0.56
CLIP3-206ENST00000593074 GAS2L1Q99501 681 aaPredicted RBP18.54■□□□□ 0.56
CLIP3-206ENST00000593074 SPATA5L1Q9BVQ7 753 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 TMCC3Q9ULS5 477 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 FANCMQ8IYD8 2048 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 CLCA1A8K7I4 914 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 FAM227AF5H4B4 570 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 CHRNB1P11230 501 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 MAGP20916 626 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 PSMB9P28065 219 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 ST13P50502 369 aaKnown RBP18.54■□□□□ 0.56
CLIP3-206ENST00000593074 CCDC85BQ15834 202 aaPredicted RBP18.54■□□□□ 0.56
CLIP3-206ENST00000593074 FBXO42Q6P3S6 717 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 SYT13Q7L8C5 426 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 TRIM48Q8IWZ4 208 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 FCGR1BQ92637 280 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 OTUB1Q96FW1 271 aaPredicted RBP18.54■□□□□ 0.56
CLIP3-206ENST00000593074 C10orf90Q96M02 699 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 OR2A5Q96R48 311 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 IMPAD1Q9NX62 359 aa18.54■□□□□ 0.56
CLIP3-206ENST00000593074 EMC8O43402 210 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 CHMP24386 653 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 CRISP1P54107 249 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 CDC42P60953 191 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 GPR18Q14330 331 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 TBCEQ15813 527 aaPredicted RBP18.53■□□□□ 0.56
CLIP3-206ENST00000593074 LRIT3Q3SXY7 679 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 DCST1Q5T197 706 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 FRMPD2BQ6IN97 320 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 CROCCP3Q8IVE0 287 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 SLC22A18ASQ8N1D0 253 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 GPBAR1Q8TDU6 330 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 ZFPM2Q8WW38 1151 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 KLHL6Q8WZ60 621 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 MYDGFQ969H8 173 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 ELP4Q96EB1 424 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 YIPF4Q9BSR8 244 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 ROGDIQ9GZN7 287 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 ANKMY1Q9P2S6 941 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 A4GNTQ9UNA3 340 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 MGAT4BQ9UQ53 548 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 ZNF780BQ9Y6R6 833 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 A0A0G2JPF8 293 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 HNRNPCL2B2RXH8 293 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 HNRNPCL3B7ZW38 293 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 SLC22A1O15245 554 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 ASNA1O43681 348 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 FOXD2O60548 495 aaPredicted RBP18.53■□□□□ 0.56
CLIP3-206ENST00000593074 CTSVO60911 334 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 CLPXO76031 633 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 CDK1P06493 297 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 HNRNPCL4P0DMR1 293 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 SMIM10L1P0DMW3 83 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 MC3RP41968 323 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 SMIM11AP58511 58 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 SNRPNP63162 240 aaKnown RBP18.53■□□□□ 0.56
CLIP3-206ENST00000593074 TNFRSF17Q02223 184 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 P2RY8Q86VZ1 359 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 OR9A2Q8NGT5 310 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 GGHQ92820 318 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 SMIM10Q96HG1 83 aa18.53■□□□□ 0.56
CLIP3-206ENST00000593074 GPR174Q9BXC1 333 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms