RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 SERTAD2Q14140 314 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 MINDY4Q4G0A6 757 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 VWA2Q5GFL6 755 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 ZNF385CQ66K41 422 aaPredicted RBP16.33■□□□□ 0.2
CXXC1-212ENST00000589940 ZFP1Q6P2D0 407 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 ENDOVQ8N8Q3 282 aaKnown RBP16.33■□□□□ 0.2
CXXC1-212ENST00000589940 OR52E4Q8NGH9 312 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 SERHL2Q9H4I8 314 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 ANKRA2Q9H9E1 313 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 NECTIN3Q9NQS3 549 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 SLC39A1Q9NY26 324 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 MAT2BQ9NZL9 334 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 LOXL2Q9Y4K0 774 aa16.33■□□□□ 0.2
CXXC1-212ENST00000589940 FER1L5A0AVI2 2057 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.32■□□□□ 0.2
CXXC1-212ENST00000589940 CREG1O75629 220 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 ONECUT2O95948 504 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 CDK4P11802 303 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 PCGF2P35227 344 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 RORAP35398 523 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 STT3AP46977 705 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 MGAT2Q10469 447 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 LASP1Q14847 261 aaKnown RBP16.32■□□□□ 0.2
CXXC1-212ENST00000589940 FHL5Q5TD97 284 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 MFSD4BQ5TF39 518 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 FAM111BQ6SJ93 734 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 DEFB124Q8NES8 71 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 FAM162AQ96A26 154 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 CTHRC1Q96CG8 243 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 LIN37Q96GY3 246 aaPredicted RBP16.32■□□□□ 0.2
CXXC1-212ENST00000589940 PTCHD1Q96NR3 888 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 DGAT2Q96PD7 388 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 MS4A4EQ96PG1 132 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 TGIF2Q9GZN2 237 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 RASSF4Q9H2L5 321 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 CXorf21Q9HAI6 301 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 THUMPD1Q9NXG2 353 aaKnown RBP16.32■□□□□ 0.2
CXXC1-212ENST00000589940 CTSFQ9UBX1 484 aa16.32■□□□□ 0.2
CXXC1-212ENST00000589940 C19orf53Q9UNZ5 99 aaPredicted RBP16.32■□□□□ 0.2
CXXC1-212ENST00000589940 PCNX2A6NKB5 2137 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 IGLV3-12A0A075B6K2 115 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 TCRBV5S2A0A599 114 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 CSO75390 466 aaKnown RBP16.31■□□□□ 0.2
CXXC1-212ENST00000589940 MT-CO3P00414 261 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 MATN1P21941 496 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 KHKP50053 298 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 ANXA11P50995 505 aaKnown RBP16.31■□□□□ 0.2
CXXC1-212ENST00000589940 LIMK1P53667 647 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 MAPK10P53779 464 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 CLDN6P56747 220 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 ZNF630Q2M218 657 aaPredicted RBP16.31■□□□□ 0.2
CXXC1-212ENST00000589940 TRMT12Q53H54 448 aaKnown RBP16.31■□□□□ 0.2
CXXC1-212ENST00000589940 DHRS13Q6UX07 377 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 GALNT12Q8IXK2 581 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 MIPOL1Q8TD10 442 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 NETO1Q8TDF5 533 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 GIMAP5Q96F15 307 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 PELOQ9BRX2 385 aaKnown RBP16.31■□□□□ 0.2
CXXC1-212ENST00000589940 IGKV3D-11A0A0A0MRZ8 115 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 HMGN4O00479 90 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 ARAFP10398 606 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 RAB15P59190 212 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 TXNL4AP83876 142 aaKnown RBP16.31■□□□□ 0.2
CXXC1-212ENST00000589940 RHAGQ02094 409 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 MAP4K2Q12851 820 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 DGAT2L6Q6ZPD8 337 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 RAB11FIP2Q7L804 512 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 VWA5B2Q8N398 1253 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 C7orf57Q8NEG2 295 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 RIT1Q92963 219 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 DUS3LQ96G46 650 aaKnown RBP16.31■□□□□ 0.2
CXXC1-212ENST00000589940 DEPDC7Q96QD5 511 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 OR51I1Q9H343 314 aa16.31■□□□□ 0.2
CXXC1-212ENST00000589940 STX18Q9P2W9 335 aaKnown RBP16.31■□□□□ 0.2
CXXC1-212ENST00000589940 NKX1-2Q9UD57 310 aaPredicted RBP16.31■□□□□ 0.2
CXXC1-212ENST00000589940 DHRS12A0PJE2 317 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 H3BNX3 289 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 MEN1O00255 615 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 CT62P0C5K7 136 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 ITIH1P19827 911 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 GALNSP34059 522 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 CDK6Q00534 326 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 OCA2Q04671 838 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 EEF1A2Q05639 463 aaKnown RBP16.3■□□□□ 0.2
CXXC1-212ENST00000589940 SCARB2Q14108 478 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 SNCBQ16143 134 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 PMEPA1Q969W9 287 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 C16orf58Q96GQ5 468 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 LRFN5Q96NI6 719 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 A4GALTQ9NPC4 353 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 EQTNQ9NQ60 294 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 WDFY3Q8IZQ1 3526 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 GPIP06744 558 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 ZNF28P17035 718 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 PSMA4P25789 261 aaKnown RBP16.3■□□□□ 0.2
CXXC1-212ENST00000589940 MFSD12Q6NUT3 480 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 SLCO6A1Q86UG4 719 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 SLC30A8Q8IWU4 369 aa16.3■□□□□ 0.2
CXXC1-212ENST00000589940 SIMC1Q8NDZ2 872 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms