RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 RGS6P49758 472 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 CRISP3P54108 245 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 SNRPGP62308 76 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 RPS21P63220 83 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 ZNF45Q02386 682 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 C1DQ13901 141 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 CST6Q15828 149 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 WSCD2Q2TBF2 565 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 ARMCX4Q5H9R4 360 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 PIP5KL1Q5T9C9 394 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 MEDAGQ5VYS4 303 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 PLAG1Q6DJT9 500 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 SZRD1Q7Z422 152 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 HORMAD2Q8N7B1 307 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 ANKRD53Q8N9V6 530 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 B3GNT7Q8NFL0 401 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 OR9Q1Q8NGQ5 310 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 NR4A3Q92570 626 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 RSPRY1Q96DX4 576 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 C12orf66Q96MD2 445 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 TIMM29Q9BSF4 260 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 SORBS1Q9BX66 1292 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 NRSN2Q9GZP1 204 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 DSN1Q9H410 356 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 MVB12BQ9H7P6 319 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 TMEM184CQ9NVA4 438 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 IRAK4Q9NWZ3 460 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 GPR83Q9NYM4 423 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 SELENONQ9NZV5 590 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 SLC13A4Q9UKG4 626 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 ZBTB32Q9Y2Y4 487 aaPredicted RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 RPL36Q9Y3U8 105 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 PEX16Q9Y5Y5 336 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 CFAP20Q9Y6A4 193 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 COLEC10Q9Y6Z7 277 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 PCM1Q15154 2024 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 FEZF1A0PJY2 475 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 PRAMEF27A3QJZ7 478 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 J3KTA2 159 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 RTCAO00442 366 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 KLHL18O94889 574 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 MED26O95402 600 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 ALDH4A1P30038 563 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 MPIP34949 423 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 LIPAP38571 399 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 KCNJ5P48544 419 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 KHKP50053 298 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 MLLT10P55197 1068 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 HTRA3P83110 453 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 GPM6BQ13491 265 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 CAMK1Q14012 370 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 OXA1LQ15070 435 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 MED22Q15528 200 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 CYP27C1Q4G0S4 372 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 NDUFAF5Q5TEU4 345 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 LAIR1Q6GTX8 287 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 DUS1LQ6P1R4 473 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 KLHL17Q6TDP4 642 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 Q6ZPB1 254 aaPredicted RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 SLC46A3Q7Z3Q1 461 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 CCDC103Q8IW40 242 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 HDDC3Q8N4P3 179 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 LMNTD1Q8N9Z9 388 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 OR8J1Q8NGP2 316 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 BBS10Q8TAM1 723 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 GANCQ8TET4 914 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 XAGE5Q8WWM1 108 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 SLC35G5Q96KT7 338 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 CAMK1GQ96NX5 476 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 TREX2Q9BQ50 279 aaPredicted RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 RHNO1Q9BSD3 238 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 FNDC11Q9BVV2 318 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 TEX12Q9BXU0 123 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 SLIRPQ9GZT3 109 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 POLR2J3Q9H1A7 115 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 CACYBPQ9HB71 228 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 MRPS30Q9NP92 439 aaKnown RBP7□□□□□ -1.29
ZNF540-206ENST00000589117 SLC35C2Q9NQQ7 365 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 ZNF226Q9NYT6 803 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 TRPC4Q9UBN4 977 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 ENTPD4Q9Y227 616 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 CFL2Q9Y281 166 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 DOCK6Q96HP0 2047 aa7□□□□□ -1.29
ZNF540-206ENST00000589117 LOC100506127A0A0U1RQW1 187 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 IRGMA1A4Y4 181 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 LRIT2A6NDA9 550 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 OTOL1A6NHN0 477 aaPredicted RBP6.99□□□□□ -1.29
ZNF540-206ENST00000589117 ANHXE9PGG2 379 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 TLR4O00206 839 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 CCRL2O00421 344 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 HMGN4O00479 90 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 ZW10O43264 779 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 ADORA3P0DMS8 318 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 GABRB1P18505 474 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 GSTM3P21266 225 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 CNR2P34972 360 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 GJA4P35212 333 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 AHRP35869 848 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 TGFBR2P37173 567 aa6.99□□□□□ -1.29
ZNF540-206ENST00000589117 GNALP38405 381 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms