RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 H0Y3Z8 333 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 SNPHO15079 494 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 GPR75O95800 540 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 BUD31P41223 144 aaPredicted RBP13.9□□□□□ -0.18
IFT20-216ENST00000588477 CASP2P42575 452 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 RAP1GDS1P52306 607 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 NRG3P56975 720 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 RPP38P78345 283 aaKnown RBP13.9□□□□□ -0.18
IFT20-216ENST00000588477 FAM27E3Q08E93 113 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 SETDB1Q15047 1291 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 TBCCQ15814 346 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 DEPDC1Q5TB30 811 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 TIGD3Q6B0B8 471 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 SULT1C3Q6IMI6 304 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 MED27Q6P2C8 311 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 PPP1R14CQ8TAE6 165 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 WNT2BQ93097 391 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 RGMAQ96B86 450 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 DERL2Q9GZP9 239 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 KLHL28Q9NXS3 571 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 ZNF226Q9NYT6 803 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 CD274Q9NZQ7 290 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 FETUBQ9UGM5 382 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 ASIC3Q9UHC3 531 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 CR1P17927 2039 aa13.9□□□□□ -0.18
IFT20-216ENST00000588477 C2orf72A6NCS6 295 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 CRLF1O75462 422 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 GCKP35557 465 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 MC3RP41968 323 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 GAB1Q13480 694 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 DDX39BQ13838 428 aaKnown RBP13.89□□□□□ -0.19
IFT20-216ENST00000588477 STEAP4Q687X5 459 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 ENPP6Q6UWR7 440 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 ANGPTL8Q6UXH0 198 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 ZNF662Q6ZS27 426 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 ADGRE4PQ86SQ3 457 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 LAS2Q8IYD9 372 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 OR7G3Q8NG95 312 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 UCN3Q969E3 161 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 UBE2E3Q969T4 207 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 PBKQ96KB5 322 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 ACBD3Q9H3P7 528 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 METTL7AQ9H8H3 244 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 POPDC3Q9HBV1 291 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 PTBP2Q9UKA9 531 aaKnown RBP13.89□□□□□ -0.19
IFT20-216ENST00000588477 PACSIN3Q9UKS6 424 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 TEX264Q9Y6I9 313 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 PCNX3Q9H6A9 2034 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 CUBNO60494 3623 aa13.89□□□□□ -0.19
IFT20-216ENST00000588477 PLPP1O14494 284 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 SMNDC1O75940 238 aaKnown RBP eCLIP13.88□□□□□ -0.19
IFT20-216ENST00000588477 CCDC166P0CW27 439 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 KRT15P19012 456 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 GALNSP34059 522 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 PTH2RP49190 550 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 FNTAP49354 379 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 SLC12A2P55011 1212 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 MGAT5Q09328 741 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 E2F2Q14209 437 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 OR4D1Q15615 310 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 KBTBD12Q3ZCT8 623 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 CDKL4Q5MAI5 379 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 DESI1Q6ICB0 168 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 TRIM42Q8IWZ5 723 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 PDIK1LQ8N165 341 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 ZCCHC7Q8N3Z6 543 aaKnown RBP13.88□□□□□ -0.19
IFT20-216ENST00000588477 OR14L1PQ8NHC6 308 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 RDH11Q8TC12 318 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 ADIPOR1Q96A54 375 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 FAM111AQ96PZ2 611 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 UCN2Q96RP3 112 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 NAP1L3Q99457 506 aaPredicted RBP13.88□□□□□ -0.19
IFT20-216ENST00000588477 MED18Q9BUE0 208 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 G6PC3Q9BUM1 346 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 CD244Q9BZW8 370 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 OR10A5Q9H207 317 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 CAB39LQ9H9S4 337 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 CLCF1Q9UBD9 225 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 MAPRE3Q9UPY8 281 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 WIF1Q9Y5W5 379 aa13.88□□□□□ -0.19
IFT20-216ENST00000588477 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 A0A1W2PR48 441 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 A0A1W2PS29 197 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 PGRMC1O00264 195 aaKnown RBP13.87□□□□□ -0.19
IFT20-216ENST00000588477 MSTNO14793 375 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 CDH16O75309 829 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 TNFSF13O75888 250 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 ABCB1P08183 1280 aaPredicted RBP13.87□□□□□ -0.19
IFT20-216ENST00000588477 CT62P0C5K7 136 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 SLC35E2BP0CK96 405 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 SLC35E2P0CK97 266 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 CD1DP15813 335 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 CRYGSP22914 178 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 ABCD3P28288 659 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 CDC25BP30305 580 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 STARP49675 285 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 RPS13P62277 151 aaKnown RBP13.87□□□□□ -0.19
IFT20-216ENST00000588477 EEF1A1P68104 462 aaKnown RBP13.87□□□□□ -0.19
IFT20-216ENST00000588477 EEF1A1P5Q5VTE0 462 aa13.87□□□□□ -0.19
IFT20-216ENST00000588477 SCIMPQ6UWF3 145 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms