RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 CAMK2AQ9UQM7 478 aa7.85□□□□□ -1.15
SDF2-204ENST00000587338 ROS1P08922 2347 aa7.85□□□□□ -1.15
SDF2-204ENST00000587338 NCKAP5O14513 1909 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 MBD3L4A6NDZ8 208 aaPredicted RBP7.84□□□□□ -1.15
SDF2-204ENST00000587338 MBD3L5A6NJ08 208 aaPredicted RBP7.84□□□□□ -1.15
SDF2-204ENST00000587338 C17orf105B2RV13 164 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 TM9SF1O15321 606 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 ERI3O43414 337 aaKnown RBP7.84□□□□□ -1.15
SDF2-204ENST00000587338 B3GALT2O43825 422 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 TRAPPC6AO75865 159 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 CNOT4O95628 575 aaKnown RBP7.84□□□□□ -1.15
SDF2-204ENST00000587338 SERPINA6P08185 405 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 GSTA1P08263 222 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 SLC35E2BP0CK96 405 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 CCDC166P0CW27 439 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 TMIGD3P0DMS9 266 aaPredicted RBP7.84□□□□□ -1.15
SDF2-204ENST00000587338 NID1P14543 1247 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 MAGEA12P43365 314 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 STXBP1P61764 594 aaKnown RBP7.84□□□□□ -1.15
SDF2-204ENST00000587338 STX4Q12846 297 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 FAM83EQ2M2I3 478 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 TSNAXIP1Q2TAA8 658 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 ZNF791Q3KP31 576 aaPredicted RBP7.84□□□□□ -1.15
SDF2-204ENST00000587338 HMBOX1Q6NT76 420 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 PAQR3Q6TCH7 311 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 SH2D5Q6ZV89 423 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 TMPRSS11BQ86T26 416 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.84□□□□□ -1.15
SDF2-204ENST00000587338 ZNF595Q8IYB9 648 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 PM20D2Q8IYS1 436 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 OR8K3Q8NH51 312 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 OR56A3Q8NH54 315 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 SLC22A8Q8TCC7 542 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 SLC2A12Q8TD20 617 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 PAQR8Q8TEZ7 354 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 CCT6BQ92526 530 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 EXT2Q93063 718 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 ISL2Q96A47 359 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 NXNL1Q96CM4 212 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 SPACA9Q96E40 222 aaPredicted RBP7.84□□□□□ -1.15
SDF2-204ENST00000587338 LINGO1Q96FE5 620 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 SECISBP2Q96T21 854 aaKnown RBP7.84□□□□□ -1.15
SDF2-204ENST00000587338 AIF1LQ9BQI0 150 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 DOHHQ9BU89 302 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 NPLQ9BXD5 320 aaPredicted RBP7.84□□□□□ -1.15
SDF2-204ENST00000587338 CAPS2Q9BXY5 557 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 ALOXE3Q9BYJ1 711 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 PELI2Q9HAT8 420 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 JKAMPQ9P055 326 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 COPS7AQ9UBW8 275 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 PLLPQ9Y342 182 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 DYRK1BQ9Y463 629 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 USF3Q68DE3 2245 aa7.84□□□□□ -1.15
SDF2-204ENST00000587338 CUBNO60494 3623 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 ANK3Q12955 4377 aaKnown RBP7.83□□□□□ -1.16
SDF2-204ENST00000587338 A0A088AWK7 358 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 SYNDIG1LA6NDD5 238 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 MBD3L3A6NE82 208 aaPredicted RBP7.83□□□□□ -1.16
SDF2-204ENST00000587338 CD8B2A6NJW9 211 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 KLHL2O95198 593 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 GUCA1CO95843 209 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 LTA4HP09960 611 aaKnown RBP7.83□□□□□ -1.16
SDF2-204ENST00000587338 COL6A2P12110 1019 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 FPR1P21462 350 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 ZNF10P21506 573 aaPredicted RBP7.83□□□□□ -1.16
SDF2-204ENST00000587338 CERS1P27544 350 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 HNRNPH1P31943 449 aaKnown RBP7.83□□□□□ -1.16
SDF2-204ENST00000587338 CPOXP36551 454 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 PTH2RP49190 550 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 PLA2G16P53816 162 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 WDR4P57081 412 aaKnown RBP7.83□□□□□ -1.16
SDF2-204ENST00000587338 IL2P60568 153 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 DMTNQ08495 405 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 SF3B4Q15427 424 aaKnown RBP eCLIP7.83□□□□□ -1.16
SDF2-204ENST00000587338 ZKSCAN8Q15776 578 aaPredicted RBP7.83□□□□□ -1.16
SDF2-204ENST00000587338 ACKR1Q16570 336 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 MPEG1Q2M385 716 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 CCDC153Q494R4 210 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 PIGGQ5H8A4 983 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 CCDC91Q7Z6B0 441 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 KLHDC8AQ8IYD2 350 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 NKAPQ8N5F7 415 aaKnown RBP7.83□□□□□ -1.16
SDF2-204ENST00000587338 C9orf106Q8NAJ2 232 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 OR10G3Q8NGC4 313 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 MBD3L2Q8NHZ7 208 aaPredicted RBP7.83□□□□□ -1.16
SDF2-204ENST00000587338 PPP1R14CQ8TAE6 165 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 ANKRD49Q8WVL7 239 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 ATL1Q8WXF7 558 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 TMEM158Q8WZ71 300 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 PIK3IP1Q96FE7 263 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 ZNF597Q96LX8 424 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 DOCK7Q96N67 2140 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 TRIM54Q9BYV2 358 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 PRDM14Q9GZV8 571 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 NMRAL1Q9HBL8 299 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 POPDC3Q9HBV1 291 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 SH2D2AQ9NP31 389 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 MKS1Q9NXB0 559 aa7.83□□□□□ -1.16
SDF2-204ENST00000587338 CPSF2Q9P2I0 782 aaKnown RBP7.83□□□□□ -1.16
SDF2-204ENST00000587338 VTI1BQ9UEU0 232 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms