RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 GSTA2P09210 222 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 CT62P0C5K7 136 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 S1PR1P21453 382 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 CRABP2P29373 138 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 OPRM1P35372 400 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 AGFG1P52594 562 aaKnown RBP13.22□□□□□ -0.29
SDF2-202ENST00000585428 NAGLUP54802 743 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 SORDQ00796 357 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 CMC1Q7Z7K0 106 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 C17orf47Q8NEP4 570 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 WFDC11Q8NEX6 87 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 RHEBL1Q8TAI7 183 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 WDR20Q8TBZ3 569 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 ZPLD1Q8TCW7 415 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 ABTB1Q969K4 478 aaPredicted RBP13.22□□□□□ -0.29
SDF2-202ENST00000585428 HSPBAP1Q96EW2 488 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 ERP44Q9BS26 406 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 UGT2B28Q9BY64 529 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 OR10A5Q9H207 317 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 PRM3Q9NNZ6 103 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 WHRNQ9P202 907 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 C15orf41Q9Y2V0 281 aa13.22□□□□□ -0.29
SDF2-202ENST00000585428 GOSR1O95249 250 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 AIFM1O95831 613 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 ABCB1P08183 1280 aaPredicted RBP13.21□□□□□ -0.29
SDF2-202ENST00000585428 NR2F6P10588 404 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 CPN1P15169 458 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 NAGAP17050 411 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 NEK2P51955 445 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 MRPS25P82663 173 aaKnown RBP13.21□□□□□ -0.29
SDF2-202ENST00000585428 KEAP1Q14145 624 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 SETDB1Q15047 1291 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 KBTBD12Q3ZCT8 623 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 EIPR1Q53HC9 387 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 DCST1Q5T197 706 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 TIGD3Q6B0B8 471 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 CYP20A1Q6UW02 462 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 RAPH1Q70E73 1250 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 TBC1D1Q86TI0 1168 aaPredicted RBP13.21□□□□□ -0.29
SDF2-202ENST00000585428 BIVMQ86UB2 503 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 L3MBTL4Q8NA19 623 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 TMEM41AQ96HV5 264 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 TRIB1Q96RU8 372 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 WDR41Q9HAD4 459 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
SDF2-202ENST00000585428 RNF14Q9UBS8 474 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 CAMK2AQ9UQM7 478 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 ACOT9Q9Y305 439 aa13.21□□□□□ -0.29
SDF2-202ENST00000585428 NCKAP5O14513 1909 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 CCDC189A1A4V9 331 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 LRRC14BA6NHZ5 514 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 SYCE1LA8MT33 242 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 GBAP04062 536 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 ABCD3P28288 659 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 PTPN6P29350 595 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 SOX18P35713 384 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 PAFAH1B1P43034 410 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 SLCO1A2P46721 670 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 TMED10P49755 219 aaKnown RBP13.2□□□□□ -0.3
SDF2-202ENST00000585428 ALDH18A1P54886 795 aaKnown RBP13.2□□□□□ -0.3
SDF2-202ENST00000585428 NRG3P56975 720 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 PCBP2Q15366 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDF2-202ENST00000585428 CPSF6Q16630 551 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDF2-202ENST00000585428 PFKFB4Q16877 469 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 WIPI1Q5MNZ9 446 aaPredicted RBP13.2□□□□□ -0.3
SDF2-202ENST00000585428 HLA-DQA1Q5Y7H0 255 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 TMEM81Q6P7N7 255 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 ADGRE4PQ86SQ3 457 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 CTAGE3PQ8IX95 158 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 CENPLQ8N0S6 344 aaPredicted RBP13.2□□□□□ -0.3
SDF2-202ENST00000585428 C9orf106Q8NAJ2 232 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 OR7G1Q8NGA0 311 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 OR4K14Q8NGD5 310 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 REPS1Q96D71 796 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 UCN2Q96RP3 112 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 SMR3AQ99954 134 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 IPPKQ9H8X2 491 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 ACTR8Q9H981 624 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 GRHL1Q9NZI5 618 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 RNF11Q9Y3C5 154 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 ANGPTL3Q9Y5C1 460 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 ACANP16112 2415 aa13.2□□□□□ -0.3
SDF2-202ENST00000585428 ABCA4P78363 2273 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 A0A1W2PPR1 153 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 HMX2A2RU54 273 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 FAM187AA6NFU0 413 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 CLCA1A8K7I4 914 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 CDH16O75309 829 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 RCBTB2O95199 551 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 ACTL6AO96019 429 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 HRGP04196 525 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 CD53P19397 219 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 PIK3R1P27986 724 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 PTGDSP41222 190 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 XKP51811 444 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 RPP38P78345 283 aaKnown RBP13.19□□□□□ -0.3
SDF2-202ENST00000585428 PHEXP78562 749 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 LTBQ06643 244 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 MGAT2Q10469 447 aa13.19□□□□□ -0.3
SDF2-202ENST00000585428 FOXF2Q12947 444 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms