RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ATAD3BQ5T9A4 648 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 B3GNT6Q6ZMB0 384 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CCNI2Q6ZMN8 369 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TECPR1Q7Z6L1 1165 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 LRRC6Q86X45 466 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM219AQ8IW50 185 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ZDHHC23Q8IYP9 409 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 PDCL2Q8N4E4 241 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 DCAF4L2Q8NA75 395 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 OR4N2Q8NGD1 307 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 OR8K1Q8NGG5 319 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 OR2AJ1Q8NGZ0 328 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM163Q8TC26 289 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 BRSK1Q8TDC3 778 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SELENOMQ8WWX9 145 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.8□□□□□ -2.121e-7■■■■■ 66.7
SMCHD1-211ENST00000584897 SLC35C1Q96A29 364 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 SPATA13Q96N96 652 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 OR6C1Q96RD1 312 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 C17orf62Q9BQA9 187 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 THAP7Q9BT49 309 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MFSD1Q9H3U5 465 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 UCK1Q9HA47 277 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 C3orf14Q9HBI5 128 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 UBE2TQ9NPD8 197 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CNIH4Q9P003 139 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 ABI3Q9P2A4 366 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 STK38LQ9Y2H1 464 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 MFHAS1Q9Y4C4 1052 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM184BQ9Y519 407 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 CACNA1GO43497 2377 aa1.8□□□□□ -2.12
SMCHD1-211ENST00000584897 UNC79Q9P2D8 2635 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 TCHHQ07283 1943 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 PLXNB3Q9ULL4 1909 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 TSPAN11A1L157 253 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 ELOVL7A1L3X0 281 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 ANKRD61A6NGH8 418 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 LRRIQ3A6PVS8 624 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 TMCO5BA8MYB1 307 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 VWC2LB2RUY7 222 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 WASH3PC4AMC7 463 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 MS4A18H0YCH9 400 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 TRIM77I1YAP6 450 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 PLPP2O43688 288 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 CNOT3O75175 753 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 KRT33AO76009 404 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 OAS1P00973 400 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SFTPBP07988 381 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SDC4P31431 198 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 HSD17B2P37059 387 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 MATKP42679 507 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 NDUFA8P51970 172 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SNAP25P60880 206 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SRP54P61011 504 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 CFHR1Q03591 330 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 CKAP4Q07065 602 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 PPIDQ08752 370 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 NME3Q13232 169 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 TRA2AQ13595 282 aaKnown RBP eCLIP1.79□□□□□ -2.128e-8■■□□□ 14.1
SMCHD1-211ENST00000584897 DPYSQ14117 519 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 GPNMBQ14956 572 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF77Q15935 545 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 MEP1BQ16820 701 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC25A52Q3SY17 297 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 C6orf136Q5SQH8 315 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 NDUFAF5Q5TEU4 345 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SPECC1LQ69YQ0 1117 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 TFAP2DQ7Z6R9 452 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 LINC00523Q86TU6 105 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 ERICH1Q86X53 443 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 CMTM8Q8IZV2 173 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 C1orf87Q8N0U7 546 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 OR5M8Q8NGP6 311 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 ARRDC2Q8TBH0 407 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC20A1Q8WUM9 679 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 METTL21AQ8WXB1 218 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 ANKRD7Q92527 254 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 RFT1Q96AA3 541 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM131CQ96AQ9 280 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 LINC00615Q96LM1 132 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 CSPG4P5Q96PW8 444 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 CPNE1Q99829 537 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 GABRG3Q99928 467 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF670Q9BS34 389 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 LMF2Q9BU23 707 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF416Q9BWM5 594 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 HAUS4Q9H6D7 363 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 CHST11Q9NPF2 352 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 GCNT4Q9P109 453 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 BAIAP2L1Q9UHR4 511 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 VDAC3Q9Y277 283 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 PTPRBP23467 1997 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 MAGEB16A2A368 324 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM150CB9EJG8 249 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 GOLGA8TH3BQL2 631 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 RIPK2O43353 540 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 PI15O43692 258 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 SPAG6O75602 509 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 KRT36O76013 467 aa1.79□□□□□ -2.12
SMCHD1-211ENST00000584897 GLCEO94923 617 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms