RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 SOX17Q9H6I2 414 aaPredicted RBP16.98■□□□□ 0.31
NDEL1-217ENST00000583683 ZCCHC3Q9NUD5 404 aaKnown RBP16.98■□□□□ 0.31
NDEL1-217ENST00000583683 MAT2BQ9NZL9 334 aa16.98■□□□□ 0.31
NDEL1-217ENST00000583683 TCRBV16S1A1N1A0A5B0 115 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 UPK1AO00322 258 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 SLITRK5O94991 958 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 CT62P0C5K7 136 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 CASP9P55211 416 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 VAC14Q08AM6 782 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 TP53BP2Q13625 1128 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 RGNQ15493 299 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 NSDHLQ15738 373 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 TRMT12Q53H54 448 aaKnown RBP16.97■□□□□ 0.31
NDEL1-217ENST00000583683 COX20Q5RI15 118 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.97■□□□□ 0.31
NDEL1-217ENST00000583683 FAM111BQ6SJ93 734 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 ANGPTL8Q6UXH0 198 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 TMPRSS7Q7RTY8 843 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 TIPARPQ7Z3E1 657 aaKnown RBP16.97■□□□□ 0.31
NDEL1-217ENST00000583683 C6orf120Q7Z4R8 191 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 IFNEQ86WN2 208 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 RNF130Q86XS8 419 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 SIMC1Q8NDZ2 872 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 PLPP5Q8NEB5 264 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 OR52N2Q8NGI0 321 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 DOK4Q8TEW6 326 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 RIT1Q92963 219 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 MOAP1Q96BY2 351 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 DGAT2Q96PD7 388 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 WDR54Q9H977 334 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 CXorf21Q9HAI6 301 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 NTMQ9P121 344 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 USP22Q9UPT9 525 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 CORO2BQ9UQ03 480 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 AP3M1Q9Y2T2 418 aa16.97■□□□□ 0.31
NDEL1-217ENST00000583683 IDSB3KWA1 339 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 EMC8O43402 210 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 KRT75O95678 551 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 GZMMP51124 257 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 PRR5P85299 388 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 FHL5Q5TD97 284 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 C6orf15Q6UXA7 325 aaPredicted RBP16.96■□□□□ 0.31
NDEL1-217ENST00000583683 SZRD1Q7Z422 152 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 CALHM3Q86XJ0 350 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 OR2L13Q8N349 312 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 FAM13CQ8NE31 585 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 B3GNT4Q9C0J1 378 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 POLR1BQ9H9Y6 1135 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 C3orf14Q9HBI5 128 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 DDX18Q9NVP1 670 aaKnown RBP16.96■□□□□ 0.31
NDEL1-217ENST00000583683 PTGFRNQ9P2B2 879 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 PADI1Q9ULC6 663 aa16.96■□□□□ 0.31
NDEL1-217ENST00000583683 A0A087WV62 115 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 PLOD3O60568 738 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 DNAJA2O60884 412 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 IFNA16P05015 189 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 IFI6P09912 130 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 GALNSP34059 522 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 GABREP78334 506 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 MAP4K2Q12851 820 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 NCF4Q15080 339 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 BHLHB9Q6PI77 547 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 SERPINA11Q86U17 422 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 GALNT12Q8IXK2 581 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 OR56A1Q8NGH5 318 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 KCTD14Q9BQ13 255 aaPredicted RBP16.96■□□□□ 0.3
NDEL1-217ENST00000583683 PELOQ9BRX2 385 aaKnown RBP16.96■□□□□ 0.3
NDEL1-217ENST00000583683 SUCOQ9UBS9 1254 aaKnown RBP16.96■□□□□ 0.3
NDEL1-217ENST00000583683 GPN3Q9UHW5 284 aaPredicted RBP16.96■□□□□ 0.3
NDEL1-217ENST00000583683 POMPQ9Y244 141 aa16.96■□□□□ 0.3
NDEL1-217ENST00000583683 C9J4A7 227 aa16.95■□□□□ 0.3
NDEL1-217ENST00000583683 ETFAP13804 333 aa16.95■□□□□ 0.3
NDEL1-217ENST00000583683 CRATP43155 626 aa16.95■□□□□ 0.3
NDEL1-217ENST00000583683 PRKAG1P54619 331 aa16.95■□□□□ 0.3
NDEL1-217ENST00000583683 RPS26P62854 115 aaKnown RBP16.95■□□□□ 0.3
NDEL1-217ENST00000583683 VWA5B2Q8N398 1253 aa16.95■□□□□ 0.3
NDEL1-217ENST00000583683 C7orf57Q8NEG2 295 aa16.95■□□□□ 0.3
NDEL1-217ENST00000583683 NUP43Q8NFH3 380 aa16.95■□□□□ 0.3
NDEL1-217ENST00000583683 SLC46A1Q96NT5 459 aa16.95■□□□□ 0.3
NDEL1-217ENST00000583683 PCDHAC1Q9H158 963 aa16.95■□□□□ 0.3
NDEL1-217ENST00000583683 ZNF639Q9UID6 485 aa16.95■□□□□ 0.3
NDEL1-217ENST00000583683 NXT1Q9UKK6 140 aaKnown RBP16.95■□□□□ 0.3
NDEL1-217ENST00000583683 C19orf53Q9UNZ5 99 aaPredicted RBP16.95■□□□□ 0.3
NDEL1-217ENST00000583683 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 DCDC2BA2VCK2 349 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 KLF7O75840 302 aaPredicted RBP16.94■□□□□ 0.3
NDEL1-217ENST00000583683 HMGN2P05204 90 aaKnown RBP16.94■□□□□ 0.3
NDEL1-217ENST00000583683 HEXBP07686 556 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 CCNYL3P0C7X3 344 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 S1PR1P21453 382 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 SLC5A2P31639 672 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 OR4D2P58180 307 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 MS4A2Q01362 244 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 FADDQ13158 208 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 TRIM25Q14258 630 aaKnown RBP16.94■□□□□ 0.3
NDEL1-217ENST00000583683 ADRM1Q16186 407 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 FXNQ16595 210 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 LANCL3Q6ZV70 420 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 OR2T12Q8NG77 320 aa16.94■□□□□ 0.3
NDEL1-217ENST00000583683 PTPMT1Q8WUK0 201 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms